RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 TAP1Q03518 808 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 TCIRG1Q13488 830 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 CUL4AQ13619 759 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 SYCP2LQ5T4T6 812 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 DPP8Q6V1X1 898 aaPredicted RBP13.23□□□□□ -0.29
SNRK-201ENST00000296088 TRIM62Q9BVG3 475 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 WNT8AQ9H1J5 351 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 SELENONQ9NZV5 590 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 LRRIQ3A6PVS8 624 aaPredicted RBP13.23□□□□□ -0.29
SNRK-201ENST00000296088 MRPS25P82663 173 aaKnown RBP13.23□□□□□ -0.29
SNRK-201ENST00000296088 TMEM154Q6P9G4 183 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 EME1Q96AY2 570 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 SUGT1Q9Y2Z0 365 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 SNTNA6NMZ2 147 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 USP17L21D6R901 530 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
SNRK-201ENST00000296088 LAMB3Q13751 1172 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 TOGARAM2Q6ZUX3 1019 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 ABI1Q8IZP0 508 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 MRPL1Q9BYD6 325 aaKnown RBP13.23□□□□□ -0.29
SNRK-201ENST00000296088 SUGCTQ9HAC7 445 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
SNRK-201ENST00000296088 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 GOLGA8FQ08AF8 430 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 GOLGA8DPQ0D2H9 430 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 LBRQ14739 615 aaKnown RBP13.23□□□□□ -0.29
SNRK-201ENST00000296088 KIF22Q14807 665 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 TBC1D19Q8N5T2 526 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 B4GALNT2Q8NHY0 566 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 RFWD2Q8NHY2 731 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 EPC1Q9H2F5 836 aa13.23□□□□□ -0.29
SNRK-201ENST00000296088 PITPNM2Q9BZ72 1349 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 SERPINB9P50453 376 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 SLC7A5Q01650 507 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 CSTF3Q12996 717 aaKnown RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 ORC2Q13416 577 aaPredicted RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 C16orf72Q14CZ0 275 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 NOP9Q86U38 636 aaKnown RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 CCT7Q99832 543 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 SOX13Q9UN79 622 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 ZSCAN20P17040 1043 aaPredicted RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 FBXW4P57775 412 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 OSBPL5Q9H0X9 879 aaPredicted RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 UBAP1Q9NZ09 502 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 MTO1Q9Y2Z2 717 aaKnown RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 CSADQ9Y600 493 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 KIF14Q15058 1648 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 CARMIL3Q8ND23 1372 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 PSMD3O43242 534 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 KCNA1Q09470 495 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 TRIP13Q15645 432 aaPredicted RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 CCNYL1Q8N7R7 359 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 IP6K1Q92551 441 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 THOC1Q96FV9 657 aaKnown RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 FSD1LQ9BXM9 530 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 FAM129AQ9BZQ8 928 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNRK-201ENST00000296088 H2AFY2Q9P0M6 372 aaPredicted RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 DTNBO60941 627 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 MDH1P40925 334 aaKnown RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 HADHAP40939 763 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 RAB42Q8N4Z0 105 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 ZFYVE19Q96K21 471 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 PPP1R2P1Q96PQ5 205 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 USP15Q9Y4E8 981 aaPredicted RBP13.22□□□□□ -0.29
SNRK-201ENST00000296088 PCDHA1Q9Y5I3 950 aa13.22□□□□□ -0.29
SNRK-201ENST00000296088 ALAS1P13196 640 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 PSMA4P25789 261 aaKnown RBP13.21□□□□□ -0.29
SNRK-201ENST00000296088 MARK3P27448 753 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 KCNJ6P48051 423 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 UGP2Q16851 508 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 MICU2Q8IYU8 434 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 PLEKHA8Q96JA3 519 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 GCNAQ96QF7 691 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 DCTN4Q9UJW0 460 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 NFIBO00712 420 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 LRRN2O75325 713 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 SPAG6O75602 509 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 SOX6P35712 828 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 RECQLP46063 649 aaPredicted RBP13.21□□□□□ -0.29
SNRK-201ENST00000296088 KRT31Q15323 416 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
SNRK-201ENST00000296088 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.29
SNRK-201ENST00000296088 SUCLG2Q96I99 432 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 ADAM30Q9UKF2 790 aa13.21□□□□□ -0.29
SNRK-201ENST00000296088 USP19O94966 1318 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms