RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PARP10Q53GL7 1025 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 CCDC137Q6PK04 289 aaKnown RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 POTEEQ6S8J3 1075 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 SFR1Q86XK3 245 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 LRRC47Q8N1G4 583 aaKnown RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 GBP7Q8N8V2 638 aaPredicted RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 SEC14L1Q92503 715 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 KCTD10Q9H3F6 313 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 CORO1CQ9ULV4 474 aaPredicted RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 BCS1LQ9Y276 419 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 DDX3YO15523 660 aaKnown RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 NTSR2O95665 410 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 FERP16591 822 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 RASA1P20936 1047 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 MARCKSL1P49006 195 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 SESN3P58005 492 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 BNIP1Q12981 228 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 CALCOCO2Q13137 446 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 BLMHQ13867 455 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 CEP120Q8N960 986 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 TSC22D3Q99576 134 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 THAP2Q9H0W7 228 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 COL18A1P39060 1754 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 AKAP3O75969 853 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 VPS41P49754 854 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 DHX34Q14147 1143 aaKnown RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 MESDQ14696 234 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 SEPT2Q15019 361 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 ZNF449Q6P9G9 518 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 LMNTD2Q8IXW0 634 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 KRT35Q92764 455 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 TAS2R14Q9NYV8 317 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 GRHL1Q9NZI5 618 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 ANKRD63C9JTQ0 380 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 GCNT3O95395 438 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 LINGO3P0C6S8 592 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 NEFHP12036 1026 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 BRAFP15056 766 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CYP11B2P19099 503 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 PLS1Q14651 629 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 PPP2R5EQ16537 467 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 SEL1L2Q5TEA6 688 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CROCCP2Q86T23 111 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 TMEM237Q96Q45 408 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 NT5C3AQ9H0P0 336 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 KCNMB3Q9NPA1 279 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 NKX1-2Q9UD57 310 aaPredicted RBP11.06□□□□□ -0.64
LMX1A-201ENST00000294816 LRRD1A4D1F6 860 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CALUO43852 315 aaPredicted RBP11.06□□□□□ -0.64
LMX1A-201ENST00000294816 PHF2O75151 1096 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 SNUPNO95149 360 aaKnown RBP11.06□□□□□ -0.64
LMX1A-201ENST00000294816 LDHBP07195 334 aaKnown RBP11.06□□□□□ -0.64
LMX1A-201ENST00000294816 ATP4AP20648 1035 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 LMNB1P20700 586 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 DRAP1Q14919 205 aaPredicted RBP11.06□□□□□ -0.64
LMX1A-201ENST00000294816 TRIP13Q15645 432 aaPredicted RBP11.06□□□□□ -0.64
LMX1A-201ENST00000294816 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CNKSR1Q969H4 720 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CEP95Q96GE4 821 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 POP1Q99575 1024 aaKnown RBP11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CARD9Q9H257 536 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CCDC87Q9NVE4 849 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 USP40Q9NVE5 1235 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 PARP2Q9UGN5 583 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 ASIC3Q9UHC3 531 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 DNAJC12Q9UKB3 198 aa11.06□□□□□ -0.64
LMX1A-201ENST00000294816 CCDC88AQ3V6T2 1871 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 A0A0A6YYK5 440 aaPredicted RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 DPPA5A6NC42 116 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 GNAT1P11488 350 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 ALADP13716 330 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 PRKCIP41743 596 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 EPHA7Q15375 998 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 SLC30A9Q6PML9 568 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 FRMD5Q7Z6J6 570 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 UBL4BQ8N7F7 174 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 RAB3IPQ96QF0 476 aaPredicted RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 RXFP1Q9HBX9 757 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 NKIRAS1Q9NYS0 192 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 ZMYND8Q9ULU4 1186 aaPredicted RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 ALG6Q9Y672 507 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 PFASO15067 1338 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 NR3C1P04150 777 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 TARSP26639 723 aaKnown RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 MARSP56192 900 aaKnown RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 KNOP1Q1ED39 458 aaKnown RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 EDRF1Q3B7T1 1238 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 SPDYCQ5MJ68 293 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 ZNF746Q6NUN9 644 aaPredicted RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 TTC27Q6P3X3 843 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 FBXO33Q7Z6M2 555 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 TXNRD3Q86VQ6 643 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 SRRM1Q8IYB3 904 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms