RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 GPRC5CQ9NQ84 441 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 STK17AQ9UEE5 414 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 PTPRSQ13332 1948 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.83■■■□□ 2.37
SSU72-201ENST00000291386 RBAK-RBAKDNI3L0D1 243 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 NCLP19338 710 aaKnown RBP29.83■■■□□ 2.37
SSU72-201ENST00000291386 GUCY2CP25092 1073 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 ME1P48163 572 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 CAPSQ13938 189 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 FAM102BQ5T8I3 360 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 SHC4Q6S5L8 630 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 CCDC73Q6ZRK6 1079 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 MAEAQ7L5Y9 396 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 RNF149Q8NC42 400 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 KIFAP3Q92845 792 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 CHAMP1Q96JM3 812 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 RUSC1Q9BVN2 902 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 TMX1Q9H3N1 280 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 TSHZ2Q9NRE2 1034 aa29.83■■■□□ 2.37
SSU72-201ENST00000291386 RBM19Q9Y4C8 960 aaKnown RBP29.83■■■□□ 2.37
SSU72-201ENST00000291386 SRGAP2CP0DJJ0 459 aa29.82■■■□□ 2.36
SSU72-201ENST00000291386 PTENP60484 403 aa29.82■■■□□ 2.36
SSU72-201ENST00000291386 SMAD3P84022 425 aaKnown RBP29.82■■■□□ 2.36
SSU72-201ENST00000291386 NFX1Q12986 1120 aaKnown RBP29.82■■■□□ 2.36
SSU72-201ENST00000291386 RRAGBQ5VZM2 374 aa29.82■■■□□ 2.36
SSU72-201ENST00000291386 LARP4BQ92615 738 aaKnown RBP29.82■■■□□ 2.36
SSU72-201ENST00000291386 ENPP3O14638 875 aa29.81■■■□□ 2.36
SSU72-201ENST00000291386 ATP2A2P16615 1042 aaKnown RBP29.81■■■□□ 2.36
SSU72-201ENST00000291386 SFPQP23246 707 aaKnown RBP eCLIP29.81■■■□□ 2.361e-7■□□□□ 11.3
SSU72-201ENST00000291386 PHKA2P46019 1235 aa29.81■■■□□ 2.36
SSU72-201ENST00000291386 PCBP1Q15365 356 aaKnown RBP eCLIP29.81■■■□□ 2.363e-9■■■□□ 16.4
SSU72-201ENST00000291386 NAALADL2Q58DX5 795 aa29.81■■■□□ 2.36
SSU72-201ENST00000291386 TSPYL2Q9H2G4 693 aaPredicted RBP29.81■■■□□ 2.36
SSU72-201ENST00000291386 AMHP03971 560 aa29.8■■■□□ 2.36
SSU72-201ENST00000291386 SSBP05455 408 aaKnown RBP eCLIP29.8■■■□□ 2.36
SSU72-201ENST00000291386 PPP2R5AQ15172 486 aa29.8■■■□□ 2.36
SSU72-201ENST00000291386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.8■■■□□ 2.365e-7■■□□□ 12.5
SSU72-201ENST00000291386 RTN4RL1Q86UN2 441 aaPredicted RBP29.8■■■□□ 2.36
SSU72-201ENST00000291386 LINC01599Q8WXQ3 324 aa29.8■■■□□ 2.36
SSU72-201ENST00000291386 C17orf75Q9HAS0 396 aa29.8■■■□□ 2.36
SSU72-201ENST00000291386 A0A087X0B3 334 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 NAMPTP43490 491 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 DEFB103AP81534 67 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 MCM6Q14566 821 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 DSC3Q14574 896 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 ARSHQ5FYA8 562 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 RESP18Q5W5W9 173 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 ADALQ6DHV7 355 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 FAM109BQ6ICB4 259 aaPredicted RBP29.79■■■□□ 2.36
SSU72-201ENST00000291386 DAW1Q8N136 415 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 DRC1Q96MC2 740 aa29.79■■■□□ 2.36
SSU72-201ENST00000291386 TTC3P53804 2025 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 HIP1RO75146 1068 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 MAPK7Q13164 816 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 CDCA2Q69YH5 1023 aaPredicted RBP29.78■■■□□ 2.36
SSU72-201ENST00000291386 BSNDQ8WZ55 320 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 TOP1MTQ969P6 601 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 MINDY3Q9H8M7 445 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 CHST12Q9NRB3 414 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 RGS18Q9NS28 235 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 CHMP5Q9NZZ3 219 aa29.78■■■□□ 2.36
SSU72-201ENST00000291386 MGEA5O60502 916 aa29.77■■■□□ 2.36
SSU72-201ENST00000291386 CSDE1O75534 798 aaKnown RBP29.77■■■□□ 2.36
SSU72-201ENST00000291386 HERC6Q8IVU3 1022 aa29.77■■■□□ 2.36
SSU72-201ENST00000291386 IFT74Q96LB3 600 aa29.77■■■□□ 2.36
SSU72-201ENST00000291386 C1orf112Q9NSG2 853 aa29.77■■■□□ 2.36
SSU72-201ENST00000291386 FAM13BQ9NYF5 915 aa29.77■■■□□ 2.36
SSU72-201ENST00000291386 GBF1Q92538 1859 aa29.76■■■□□ 2.36
SSU72-201ENST00000291386 MYH11P35749 1972 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 SOX1O00570 391 aaPredicted RBP29.76■■■□□ 2.35
SSU72-201ENST00000291386 FGFR4P22455 802 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 STAT6P42226 847 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 E2F4Q16254 413 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 GPBP1Q86WP2 473 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 CUEDC2Q9H467 287 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 KCNG1Q9UIX4 513 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 ODF2LQ9ULJ1 636 aa29.76■■■□□ 2.35
SSU72-201ENST00000291386 GRXCR1A8MXD5 290 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 GJB5O95377 273 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 CMA1P23946 247 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 MBTD1Q05BQ5 628 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 CATSPER4Q7RTX7 472 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 MYOCDQ8IZQ8 938 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 CRIPAKQ8N1N5 446 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 ADAM2Q99965 735 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 PANK2Q9BZ23 570 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 C2orf40Q9H1Z8 148 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 POLD4Q9HCU8 107 aa29.75■■■□□ 2.35
SSU72-201ENST00000291386 DENND3A2RUS2 1198 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 LRRIQ4A6NIV6 560 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 ZSCAN20P17040 1043 aaPredicted RBP29.74■■■□□ 2.35
SSU72-201ENST00000291386 GPR153Q6NV75 609 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 SLC24A5Q71RS6 500 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 SV2BQ7L1I2 683 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 ZBTB8OSQ8IWT0 167 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 PDILTQ8N807 584 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 PYM1Q9BRP8 204 aaKnown RBP29.74■■■□□ 2.35
SSU72-201ENST00000291386 NTPCRQ9BSD7 190 aaKnown RBP29.74■■■□□ 2.35
SSU72-201ENST00000291386 TRAIPQ9BWF2 469 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 PBX4Q9BYU1 374 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms