RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 KLRF2D3W0D1 207 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 M0QZ92 97 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 NARSO43776 548 aaKnown RBP9.59□□□□□ -0.87
RPS3A-201ENST00000274065 CLASP2O75122 1294 aaKnown RBP9.59□□□□□ -0.87
RPS3A-201ENST00000274065 KCNA2P16389 499 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 MX1P20591 662 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 TDGQ13569 410 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 MCMDC2Q4G0Z9 681 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 KCNT2Q6UVM3 1135 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 MRPL43Q8N983 215 aaKnown RBP9.59□□□□□ -0.87
RPS3A-201ENST00000274065 TMEM40Q8WWA1 233 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 SEPT1Q8WYJ6 367 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 PIGSQ96S52 555 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 PCYT2Q99447 389 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 MAD2L2Q9UI95 211 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 DUSP12Q9UNI6 340 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 GINS2Q9Y248 185 aa9.59□□□□□ -0.87
RPS3A-201ENST00000274065 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
RPS3A-201ENST00000274065 SALL3Q9BXA9 1300 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 KDM3AQ9Y4C1 1321 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 FNDC1Q4ZHG4 1894 aaPredicted RBP9.58□□□□□ -0.88
RPS3A-201ENST00000274065 DENND3A2RUS2 1198 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 RRN3P2A6NIE6 340 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 SPTLC1O15269 473 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 WFS1O76024 890 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 RPLP2P05387 115 aaKnown RBP9.58□□□□□ -0.88
RPS3A-201ENST00000274065 SP9P0CG40 484 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 SNRPBP14678 240 aaKnown RBP9.58□□□□□ -0.88
RPS3A-201ENST00000274065 EPCAMP16422 314 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 HNRNPUQ00839 825 aaKnown RBP eCLIP9.58□□□□□ -0.88
RPS3A-201ENST00000274065 KRT76Q01546 638 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 NMIQ13287 307 aaPredicted RBP9.58□□□□□ -0.88
RPS3A-201ENST00000274065 SMC1AQ14683 1233 aaKnown RBP9.58□□□□□ -0.88
RPS3A-201ENST00000274065 ST3GAL2Q16842 350 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 CCDC178Q5BJE1 867 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 ATAT1Q5SQI0 421 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 TMC5Q6UXY8 1006 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 SLC24A5Q71RS6 500 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 EVI5LQ96CN4 794 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 CASD1Q96PB1 797 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 SMARCAD1Q9H4L7 1026 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 KCNK12Q9HB15 430 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 ATP6V0A4Q9HBG4 840 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 RGS18Q9NS28 235 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 RNF19AQ9NV58 838 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 ZSWIM5Q9P217 1185 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 RALYQ9UKM9 306 aaKnown RBP9.58□□□□□ -0.88
RPS3A-201ENST00000274065 PCDHA2Q9Y5H9 948 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 MYH6P13533 1939 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 ATRXP46100 2492 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 KAT6AQ92794 2004 aa9.58□□□□□ -0.88
RPS3A-201ENST00000274065 PALM3A6NDB9 673 aaPredicted RBP9.57□□□□□ -0.88
RPS3A-201ENST00000274065 CYTH3O43739 400 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 RPS6KA5O75582 802 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 DCNP07585 359 aaKnown RBP9.57□□□□□ -0.88
RPS3A-201ENST00000274065 CA8P35219 290 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 ATXN1P54253 815 aaKnown RBP9.57□□□□□ -0.88
RPS3A-201ENST00000274065 FAM189BP81408 668 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 KRT17Q04695 432 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 PLCB4Q15147 1175 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 SPECC1Q5M775 1068 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 PCNX4Q63HM2 1172 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 USP17L6PQ6QN14 398 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 SUMF1Q8NBK3 374 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 GIMAP8Q8ND71 665 aaPredicted RBP9.57□□□□□ -0.88
RPS3A-201ENST00000274065 AUTS2Q8WXX7 1259 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 ZNF558Q96NG5 402 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 TMEM117Q9H0C3 514 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 RIOX1Q9H6W3 641 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 C1orf112Q9NSG2 853 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 TMEM161AQ9NX61 479 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 SPG21Q9NZD8 308 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 ST3GAL5Q9UNP4 418 aa9.57□□□□□ -0.88
RPS3A-201ENST00000274065 SMIM35A0A1B0GVV1 85 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 ZNF213O14771 459 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 CXCL14O95715 111 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 PPM1AP35813 382 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 IFIT1BQ5T764 474 aaKnown RBP9.56□□□□□ -0.88
RPS3A-201ENST00000274065 XRRA1Q6P2D8 792 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 ZC3H14Q6PJT7 736 aaKnown RBP9.56□□□□□ -0.88
RPS3A-201ENST00000274065 LYPD8Q6UX82 237 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 OTOP3Q7RTS5 596 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 NLRX1Q86UT6 975 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 FAM228AQ86W67 206 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 SLC39A11Q8N1S5 342 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 RSAD2Q8WXG1 361 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 BAP1Q92560 729 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 ACSF2Q96CM8 615 aaPredicted RBP9.56□□□□□ -0.88
RPS3A-201ENST00000274065 GPRASP2Q96D09 838 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 PPP1R16BQ96T49 567 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 TBC1D17Q9HA65 648 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 DZANK1Q9NVP4 752 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 DLGAP2Q9P1A6 1054 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 CA14Q9ULX7 337 aa9.56□□□□□ -0.88
RPS3A-201ENST00000274065 PNMA6FA0A0J9YX94 578 aa9.55□□□□□ -0.88
RPS3A-201ENST00000274065 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.55□□□□□ -0.88
RPS3A-201ENST00000274065 DCDC2BA2VCK2 349 aa9.55□□□□□ -0.88
RPS3A-201ENST00000274065 NT5C1B-RDH14C9J2C7 533 aa9.55□□□□□ -0.88
RPS3A-201ENST00000274065 N4BP1O75113 896 aaKnown RBP9.55□□□□□ -0.88
RPS3A-201ENST00000274065 ITGB5P18084 799 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms