RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 HERVK_113Q902F9 699 aa14.15□□□□□ -0.14
SS18-202ENST00000269138 SEPT8Q92599 483 aa14.15□□□□□ -0.14
SS18-202ENST00000269138 GCOM2Q9BZD3 368 aaPredicted RBP14.15□□□□□ -0.14
SS18-202ENST00000269138 MINDY3Q9H8M7 445 aa14.15□□□□□ -0.14
SS18-202ENST00000269138 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
SS18-202ENST00000269138 FAM13BQ9NYF5 915 aa14.15□□□□□ -0.14
SS18-202ENST00000269138 KCNH3Q9ULD8 1083 aa14.15□□□□□ -0.14
SS18-202ENST00000269138 SQORQ9Y6N5 450 aa14.15□□□□□ -0.14
SS18-202ENST00000269138 SIP14410 1827 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 RPS6KA5O75582 802 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 PFKFB1P16118 471 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 GUCY2CP25092 1073 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 CDC42EP1Q00587 391 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 NFX1Q12986 1120 aaKnown RBP14.14□□□□□ -0.15
SS18-202ENST00000269138 PAK2Q13177 524 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 MXD4Q14582 209 aaPredicted RBP14.14□□□□□ -0.15
SS18-202ENST00000269138 ZNF710Q8N1W2 664 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 FSIP1Q8NA03 581 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 USP38Q8NB14 1042 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 STAMQ92783 540 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 TMX1Q9H3N1 280 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 GOLPH3LQ9H4A5 285 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
SS18-202ENST00000269138 A0A1W2PQ27 194 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 A0A1W2PQ64 194 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 A0A1W2PQD8 194 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 MYMKA6NI61 221 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 NDUFA8P51970 172 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 GIT2Q14161 759 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 SV2BQ7L1I2 683 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 RTN4RL1Q86UN2 441 aaPredicted RBP14.13□□□□□ -0.15
SS18-202ENST00000269138 TDHQ8IZJ6 230 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 KIFAP3Q92845 792 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 RNPC3Q96LT9 517 aaKnown RBP14.13□□□□□ -0.15
SS18-202ENST00000269138 REEP2Q9BRK0 252 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 HPSEQ9Y251 543 aa14.13□□□□□ -0.15
SS18-202ENST00000269138 LRRIQ4A6NIV6 560 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 ZBBXA8MT70 800 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 MGEA5O60502 916 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 ACTN1P12814 892 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 PTENP60484 403 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 IKBKEQ14164 716 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 TFDP1Q14186 410 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
SS18-202ENST00000269138 DYMQ7RTS9 669 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 IQUBQ8NA54 791 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 LINC01599Q8WXQ3 324 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 KIFC3Q9BVG8 833 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 KCND2Q9NZV8 630 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 SERTAD1Q9UHV2 236 aa14.12□□□□□ -0.15
SS18-202ENST00000269138 FAM237AA0A1B0GTK4 181 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 ABHD14A-ACY1A0A1B0GW23 586 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.11□□□□□ -0.15
SS18-202ENST00000269138 GPR182O15218 404 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 GADD45BO75293 160 aaPredicted RBP14.11□□□□□ -0.15
SS18-202ENST00000269138 KRT18P05783 430 aaKnown RBP14.11□□□□□ -0.15
SS18-202ENST00000269138 PHKA2P46019 1235 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 PEX3P56589 373 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 WDR5P61964 334 aaKnown RBP14.11□□□□□ -0.15
SS18-202ENST00000269138 DEFB103AP81534 67 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 POU5F1BQ06416 359 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 SRGAP1Q7Z6B7 1085 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 TMCO2Q7Z6W1 182 aaPredicted RBP14.11□□□□□ -0.15
SS18-202ENST00000269138 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
SS18-202ENST00000269138 MRPS27Q92552 414 aaKnown RBP14.11□□□□□ -0.15
SS18-202ENST00000269138 DDX12PQ92771 950 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 APBB2Q92870 758 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 IFT74Q96LB3 600 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 DRC1Q96MC2 740 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 TIPINQ9BVW5 301 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
SS18-202ENST00000269138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
SS18-202ENST00000269138 CCDC169A6NNP5 214 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 ENPP3O14638 875 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 ACTN4O43707 911 aaKnown RBP14.1□□□□□ -0.15
SS18-202ENST00000269138 BAIAP3O94812 1187 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 NAMPTP43490 491 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 NPTX2P47972 431 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 MBTD1Q05BQ5 628 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 DSC3Q14574 896 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 LONRF3Q496Y0 759 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 CDCA2Q69YH5 1023 aaPredicted RBP14.1□□□□□ -0.15
SS18-202ENST00000269138 FAM109BQ6ICB4 259 aaPredicted RBP14.1□□□□□ -0.15
SS18-202ENST00000269138 CATSPER4Q7RTX7 472 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 DEPTORQ8TB45 409 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 DNAJC19Q96DA6 116 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 CUEDC2Q9H467 287 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 KBTBD4Q9NVX7 518 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 SLC4A7Q9Y6M7 1214 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 LOXHD1Q8IVV2 1947 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 RANBP2P49792 3224 aaKnown RBP14.1□□□□□ -0.15
SS18-202ENST00000269138 GOLGA6L4A6NEF3 574 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 GRXCR1A8MXD5 290 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 INO80B-WBP1J3KQ70 363 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 FAM13AO94988 1023 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 PLS3P13797 630 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
SS18-202ENST00000269138 CASP1P29466 404 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms