RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ADA2Q9NZK5 511 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 STRIP2Q9ULQ0 834 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 GMNCA6NCL1 334 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 UNC13DQ70J99 1090 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 SEPT8Q92599 483 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 FSD1LQ9BXM9 530 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 PTPN12Q05209 780 aaKnown RBP19.19■□□□□ 0.66
COL5A3-201ENST00000264828 DEUP1Q05D60 604 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 OSBPL9Q96SU4 736 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 KIFC3Q9BVG8 833 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 GPC5P78333 572 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 ARL6IP4Q66PJ3 421 aaKnown RBP19.19■□□□□ 0.66
COL5A3-201ENST00000264828 CCNYL1Q8N7R7 359 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 VPS39Q96JC1 886 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 ABCD1P33897 745 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 TOB2Q14106 344 aaPredicted RBP19.19■□□□□ 0.66
COL5A3-201ENST00000264828 PDCD6IPQ8WUM4 868 aaKnown RBP19.19■□□□□ 0.66
COL5A3-201ENST00000264828 RBM41Q96IZ5 413 aaKnown RBP19.19■□□□□ 0.66
COL5A3-201ENST00000264828 OSBPL1AQ9BXW6 950 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 SLC13A1Q9BZW2 595 aa19.19■□□□□ 0.66
COL5A3-201ENST00000264828 CROCC2H7BZ55 1655 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 CREB3O43889 395 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 POU5F1BQ06416 359 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 RASGRF1Q13972 1273 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 CCDC144BQ3MJ40 725 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SUSD4Q5VX71 490 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 PPM1NQ8N819 430 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 CDHR1Q96JP9 859 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 TTC25Q96NG3 672 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 FAM49AQ9H0Q0 323 aaPredicted RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 KIF17Q9P2E2 1029 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SUGT1Q9Y2Z0 365 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 RAD17O75943 681 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 NR3C1P04150 777 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SARM1Q6SZW1 724 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SIRT2Q8IXJ6 389 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 ZCCHC17Q9NP64 241 aaKnown RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SFMBT1Q9UHJ3 866 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 CYP2D6P10635 497 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 PAPOLAP51003 745 aaKnown RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SURF1Q15526 300 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 TMEM270Q6UE05 265 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 BZW1Q7L1Q6 419 aaKnown RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 DDX47Q9H0S4 455 aaKnown RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 CPVLQ9H3G5 476 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SARS2Q9NP81 518 aaKnown RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 BBOX1O75936 387 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 ZNF746Q6NUN9 644 aaPredicted RBP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 C11orf70Q9BRQ4 267 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 ZRANB2O95218 330 aaKnown RBP eCLIP19.18■□□□□ 0.66
COL5A3-201ENST00000264828 CHGBP05060 677 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 BTBD6Q96KE9 485 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 LRRC37BQ96QE4 947 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 SNX5Q9Y5X3 404 aa19.18■□□□□ 0.66
COL5A3-201ENST00000264828 KPNA7A9QM74 516 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 KRT38O76015 456 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ALCAMQ13740 583 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 IMPG1Q17R60 797 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ZNF667Q5HYK9 610 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 PARP9Q8IXQ6 854 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ZNF564Q8TBZ8 553 aaPredicted RBP19.17■□□□□ 0.66
COL5A3-201ENST00000264828 SAAL1Q96ER3 474 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ATG3Q9NT62 314 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 PCSK1NQ9UHG2 260 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 USP17L5A8MUK1 530 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 E9PMD0 336 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 SASH1O94885 1247 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 CC2D2BQ6DHV5 1058 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 AGR3Q8TD06 166 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 COG4Q9H9E3 785 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ALKQ9UM73 1620 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 CHUKO15111 745 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 KLHL38Q2WGJ6 581 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 SH3RF3Q8TEJ3 882 aaPredicted RBP19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ARL8AQ96BM9 186 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 DACH2Q96NX9 599 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ATP5HO75947 161 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 AP2B1P63010 937 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 GRAPQ13588 217 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 TBC1D10CQ8IV04 446 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 GRAPLQ8TC17 118 aaPredicted RBP19.17■□□□□ 0.66
COL5A3-201ENST00000264828 RAD54LQ92698 747 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ZC4H2Q9NQZ6 224 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 PCDHA6Q9UN73 950 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 PCDHA8Q9Y5H6 950 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 GTPBP10A4D1E9 387 aaKnown RBP19.17■□□□□ 0.66
COL5A3-201ENST00000264828 CYB5R4Q7L1T6 521 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 IFT43Q96FT9 208 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
COL5A3-201ENST00000264828 CEP152O94986 1710 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 MYCP01106 439 aaPredicted RBP19.16■□□□□ 0.66
COL5A3-201ENST00000264828 ERFP50548 548 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 COASYQ13057 564 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 ANO4Q32M45 955 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 BRINP3Q76B58 766 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 GANCQ8TET4 914 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms