RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 ATP6V1G2O95670 118 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 CCDC124Q96CT7 223 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 ERP27Q96DN0 273 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 CD248Q9HCU0 757 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 WHRNQ9P202 907 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 FOXR2Q6PJQ5 311 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 DYDC2Q96IM9 177 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 MMADHCQ9H3L0 296 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 HMGB3O15347 200 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 TTLL1O95922 423 aa12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 ACBD5Q5T8D3 534 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 SMCR8Q8TEV9 937 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 RIN2Q8WYP3 895 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-201ENST00000264709 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 RARGP13631 454 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 SEC24CP53992 1094 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 SLC44A4Q53GD3 710 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 HOMEZQ8IX15 550 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 CEP70Q8NHQ1 597 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 INPP5DQ92835 1189 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 STK33Q9BYT3 514 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 PSMC3IPQ9P2W1 217 aaPredicted RBP12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 NEDD4P46934 1319 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 N4BP2Q86UW6 1770 aaPredicted RBP12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 SOX5P35711 763 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 KRT81Q14533 505 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 ATL2Q8NHH9 583 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 SNX24Q9Y343 169 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 TRIM49BA6NDI0 452 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 SARSP49591 514 aaKnown RBP12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 HIC1Q14526 733 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 EEF2KMTQ96G04 330 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 AMACRQ9UHK6 382 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 MCM8Q9UJA3 840 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 STRIP2Q9ULQ0 834 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 RAD51CO43502 376 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 PIGOQ8TEQ8 1089 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 CCDC17Q96LX7 622 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 TBK1Q9UHD2 729 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 KRT3P12035 628 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 SLC12A2P55011 1212 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 OTUD6AQ7L8S5 288 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 RAD54LQ92698 747 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 SH3GL2Q99962 352 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 C10orf88Q9H8K7 445 aa12.46□□□□□ -0.41
DNMT3A-201ENST00000264709 PLA2G4BP0C869 781 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 PLS3P13797 630 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 FAM47EQ6ZV65 393 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 OSBPL8Q9BZF1 889 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 C6orf229H3BNL8 230 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 K7ENM7 598 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 PGM1P36871 562 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 CMTM5Q96DZ9 223 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 FAM167BQ9BTA0 163 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 MKNK1Q9BUB5 465 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 PCDHA1Q9Y5I3 950 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 CPS1P31327 1500 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 GSCP56915 257 aaPredicted RBP12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 PDE1CQ14123 709 aaPredicted RBP12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 IRGCQ6NXR0 463 aa12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 PPARGC1AQ9UBK2 798 aaKnown RBP12.46□□□□□ -0.42
DNMT3A-201ENST00000264709 COPEO14579 308 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 CARSP49589 748 aaKnown RBP12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 MMEL1Q495T6 779 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 TRIM59Q8IWR1 403 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 IGDCC4Q8TDY8 1250 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 VPS41P49754 854 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 RASGRF1Q13972 1273 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 MCF2P10911 925 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 ARHGAP22Q7Z5H3 698 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 KIF9Q9HAQ2 790 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 SMARCA1P28370 1054 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 ERVK-24P63145 666 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 TMPRSS15P98073 1019 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 NAIF1Q69YI7 327 aaPredicted RBP12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 ADAT2Q7Z6V5 191 aaKnown RBP12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 CCT6BQ92526 530 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 TRABDQ9H4I3 376 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 PTPN21Q16825 1174 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 RBBP8NLQ8NC74 664 aaPredicted RBP12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 KCNK16Q96T55 309 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 KCNA6P17658 529 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 CDC27P30260 824 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
DNMT3A-201ENST00000264709 RPS6KC1Q96S38 1066 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms