RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ZNF711Q9Y462 761 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 CALB2P22676 271 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 SCNN1BP51168 640 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 PDE1CQ14123 709 aaPredicted RBP17.47■□□□□ 0.39
GPC1-201ENST00000264039 PPP2R5EQ16537 467 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 ZNF662Q6ZS27 426 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 WDR66Q8TBY9 1149 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 MAIP1Q8WWC4 291 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 PWWP2AQ96N64 755 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
GPC1-201ENST00000264039 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 PCDHGC5Q9Y5F6 944 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 AHCYL1O43865 530 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 HNRNPCP07910 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
GPC1-201ENST00000264039 KCNQ4P56696 695 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 CNGA2Q16280 664 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 TEX9Q8N6V9 391 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 ACTRT1Q8TDG2 376 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 UCMAQ8WVF2 138 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 SLCO1B3Q9NPD5 702 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 DNAJC12Q9UKB3 198 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 TCRBV5S4A2TA0A5A2 114 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 WTIPA6NIX2 430 aaPredicted RBP17.47■□□□□ 0.39
GPC1-201ENST00000264039 GOLGA8SH3BPF8 625 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 GOLGA8MH3BSY2 632 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 PLA2G4BP0C869 781 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 TRIM49P0CI25 452 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 TRIM49CP0CI26 452 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 HGSNATQ68CP4 663 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 RAB3IL1Q8TBN0 382 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 MYLK2Q9H1R3 596 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 RNPEPL1Q9HAU8 725 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 RXFP1Q9HBX9 757 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 PKD2L1Q9P0L9 805 aa17.47■□□□□ 0.39
GPC1-201ENST00000264039 XRN1Q8IZH2 1706 aaKnown RBP17.46■□□□□ 0.39
GPC1-201ENST00000264039 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.46■□□□□ 0.39
GPC1-201ENST00000264039 KRT5P13647 590 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 PRDX5P30044 214 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 RPL21P46778 160 aaKnown RBP17.46■□□□□ 0.39
GPC1-201ENST00000264039 CTTNQ14247 550 aaKnown RBP17.46■□□□□ 0.39
GPC1-201ENST00000264039 ZNF268Q14587 947 aaPredicted RBP17.46■□□□□ 0.39
GPC1-201ENST00000264039 DRAP1Q14919 205 aaPredicted RBP17.46■□□□□ 0.39
GPC1-201ENST00000264039 SNX30Q5VWJ9 437 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 CCNJLQ8IV13 435 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 BTBD6Q96KE9 485 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 FAM196BA6NMK8 535 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 PIAS1O75925 651 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 LINGO3P0C6S8 592 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 STAT3P40763 770 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 RAB27AP51159 221 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 MAPK7Q13164 816 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 ATG4AQ8WYN0 398 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 TCEAL9Q9UHQ7 104 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 CHMP2BQ9UQN3 213 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 FRMD4BQ9Y2L6 1034 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 LAD1O00515 517 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 CALUO43852 315 aaPredicted RBP17.46■□□□□ 0.39
GPC1-201ENST00000264039 SLC16A2P36021 539 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 SPATA24Q86W54 205 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 MFN1Q8IWA4 741 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 PPM1KQ8N3J5 372 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 STK32AQ8WU08 396 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 RAD54LQ92698 747 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 STK17AQ9UEE5 414 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 ALG6Q9Y672 507 aa17.46■□□□□ 0.39
GPC1-201ENST00000264039 KLHL33A6NCF5 533 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 PEX5P50542 639 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 CWF19L1Q69YN2 538 aaKnown RBP17.45■□□□□ 0.38
GPC1-201ENST00000264039 PPP1R21Q6ZMI0 780 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 MAML1Q92585 1016 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 NMD3Q96D46 503 aaKnown RBP17.45■□□□□ 0.38
GPC1-201ENST00000264039 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 CDC42EP4Q9H3Q1 356 aaKnown RBP17.45■□□□□ 0.38
GPC1-201ENST00000264039 KDM6AO15550 1401 aaPredicted RBP17.45■□□□□ 0.38
GPC1-201ENST00000264039 PVALEFA0A1B0GWK0 134 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 EXOC3L1Q86VI1 746 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 PIP4K2CQ8TBX8 421 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 SCFD2Q8WU76 684 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 SPOCK2Q92563 424 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 THAP2Q9H0W7 228 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 SMYD3Q9H7B4 428 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 ERVK-5Q9HDB9 667 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 CHCHD3Q9NX63 227 aaKnown RBP17.45■□□□□ 0.38
GPC1-201ENST00000264039 DNM3Q9UQ16 869 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 PODXLO00592 558 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 CLDN3O15551 220 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 FTLP02792 175 aaPredicted RBP17.45■□□□□ 0.38
GPC1-201ENST00000264039 LMNB1P20700 586 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 PRR16Q569H4 304 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 CCDC124Q96CT7 223 aaKnown RBP17.45■□□□□ 0.38
GPC1-201ENST00000264039 HIC2Q96JB3 615 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 SYT15Q9BQS2 421 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 MKNK1Q9BUB5 465 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 KIAA1683Q9H0B3 1180 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 USP40Q9NVE5 1235 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 SLAIN2Q9P270 581 aa17.45■□□□□ 0.38
GPC1-201ENST00000264039 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms