RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ZNF484Q5JVG2 852 aa14.29□□□□□ -0.12
VAMP7-201ENST00000262640 FRMD5Q7Z6J6 570 aa14.29□□□□□ -0.12
VAMP7-201ENST00000262640 TCP11Q8WWU5 503 aa14.29□□□□□ -0.12
VAMP7-201ENST00000262640 KCNN1Q92952 543 aa14.29□□□□□ -0.12
VAMP7-201ENST00000262640 FAM184BQ9ULE4 1060 aa14.29□□□□□ -0.12
VAMP7-201ENST00000262640 TBX20Q9UMR3 447 aa14.29□□□□□ -0.12
VAMP7-201ENST00000262640 MGAMO43451 1857 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 DOCK3Q8IZD9 2030 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 DENND3A2RUS2 1198 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 CLIC2O15247 247 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 EPB41P11171 864 aaKnown RBP14.28□□□□□ -0.12
VAMP7-201ENST00000262640 FKBP15Q5T1M5 1219 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 IER5Q5VY09 327 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 MFSD14CQ5VZR4 134 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 MAP4K3Q8IVH8 894 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 LRRC8AQ8IWT6 810 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 TMEM174Q8WUU8 243 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 ZNF830Q96NB3 372 aaPredicted RBP14.28□□□□□ -0.12
VAMP7-201ENST00000262640 C16orf70Q9BSU1 422 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 ARHGAP28Q9P2N2 729 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 Q9Y3F1 56 aa14.28□□□□□ -0.12
VAMP7-201ENST00000262640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.28□□□□□ -0.12
VAMP7-201ENST00000262640 IGKV6-21A0A0C4DH24 114 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 A6NJR5 290 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 DYNC1LI2O43237 492 aaPredicted RBP14.27□□□□□ -0.12
VAMP7-201ENST00000262640 SFPQP23246 707 aaKnown RBP eCLIP14.27□□□□□ -0.12
VAMP7-201ENST00000262640 GLRA2P23416 452 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 TRIM59Q8IWR1 403 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 C12orf56Q8IXR9 622 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 ASAP3Q8TDY4 903 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 CACTINQ8WUQ7 758 aaKnown RBP14.27□□□□□ -0.12
VAMP7-201ENST00000262640 MKNK1Q9BUB5 465 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 NDST4Q9H3R1 872 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 RNPEPQ9H4A4 650 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 METTL14Q9HCE5 456 aaKnown RBP14.27□□□□□ -0.12
VAMP7-201ENST00000262640 DMAC2Q9NW81 257 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 COL1A2P08123 1366 aa14.27□□□□□ -0.12
VAMP7-201ENST00000262640 ESPNB1AK53 854 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 ZNF286BP0CG31 522 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 FLT3LGP49771 235 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 PPP2R3AQ06190 1150 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 TRIM14Q14142 442 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 PPFIBP1Q86W92 1011 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 RNF186Q9NXI6 227 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 ARMCX3Q9UH62 379 aaPredicted RBP14.27□□□□□ -0.13
VAMP7-201ENST00000262640 GABRQQ9UN88 632 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 ADGRA3Q8IWK6 1321 aa14.27□□□□□ -0.13
VAMP7-201ENST00000262640 H3BRB1 525 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 PSMC2P35998 433 aaKnown RBP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 VEGFBP49765 207 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 ARID5BQ14865 1188 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 CEP135Q66GS9 1140 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 DEPTORQ8TB45 409 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 IKZF4Q9H2S9 585 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 TUT1Q9H6E5 874 aaKnown RBP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 TRPA1O75762 1119 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 AKAP3O75969 853 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 TPM1P09493 284 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 AKR1A1P14550 325 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 INSRRP14616 1297 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 MSNP26038 577 aaKnown RBP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 PRKCZQ05513 592 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 MXD4Q14582 209 aaPredicted RBP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 BRDTQ58F21 947 aaPredicted RBP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
VAMP7-201ENST00000262640 AP5M1Q9H0R1 490 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 FRMD4BQ9Y2L6 1034 aa14.26□□□□□ -0.13
VAMP7-201ENST00000262640 LRRIQ4A6NIV6 560 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 CPT1AP50416 773 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 CYP2J2P51589 502 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 FAM186BQ8IYM0 893 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 RETREG2Q8NC44 543 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
VAMP7-201ENST00000262640 MAGEB2O15479 319 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 NRDCO43847 1150 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 C22orf31O95567 290 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 CYBAP13498 195 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 CASP4P49662 377 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 LRMPQ12912 555 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 CAPSQ13938 189 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 TRAPPC12Q8WVT3 735 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 TRIB2Q92519 343 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
VAMP7-201ENST00000262640 AKR1B15C9JRZ8 316 aaPredicted RBP14.24□□□□□ -0.13
VAMP7-201ENST00000262640 HOXD10P28358 340 aa14.24□□□□□ -0.13
VAMP7-201ENST00000262640 STRN3Q13033 797 aa14.24□□□□□ -0.13
VAMP7-201ENST00000262640 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
VAMP7-201ENST00000262640 DRP2Q13474 957 aa14.24□□□□□ -0.13
VAMP7-201ENST00000262640 SYCP1Q15431 976 aa14.24□□□□□ -0.13
VAMP7-201ENST00000262640 IQCDQ96DY2 449 aa14.24□□□□□ -0.13
VAMP7-201ENST00000262640 TMEM134Q9H6X4 195 aa14.24□□□□□ -0.13
VAMP7-201ENST00000262640 SUCLA2Q9P2R7 463 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms