RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CAPN6Q9Y6Q1 641 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 GTPBP10A4D1E9 387 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 SPDYE4A6NLX3 237 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 AFPP02771 609 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 SERPING1P05155 500 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 ELNP15502 786 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 POLR2FP61218 127 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 GRB14Q14449 540 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 PKN2Q16513 984 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 ZC2HC1CQ53FD0 456 aaPredicted RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 OLIG1Q8TAK6 271 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 SH3TC2Q8TF17 1288 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 TMEM174Q8WUU8 243 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 PDCD2LQ9BRP1 358 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 MKNK1Q9BUB5 465 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 PARD6BQ9BYG5 372 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 METTL14Q9HCE5 456 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 NLRC4Q9NPP4 1024 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 PUF60Q9UHX1 559 aaKnown RBP19.34■□□□□ 0.69
SSB-201ENST00000260956 NENFQ9UMX5 172 aa19.34■□□□□ 0.69
SSB-201ENST00000260956 OAZ1P54368 228 aa19.33■□□□□ 0.68
SSB-201ENST00000260956 ARHGEF6Q15052 776 aa19.33■□□□□ 0.68
SSB-201ENST00000260956 SFMBT2Q5VUG0 894 aa19.33■□□□□ 0.68
SSB-201ENST00000260956 CC2D1AQ6P1N0 951 aaPredicted RBP19.33■□□□□ 0.68
SSB-201ENST00000260956 MROH8Q9H579 483 aa19.33■□□□□ 0.68
SSB-201ENST00000260956 SALL4Q9UJQ4 1053 aa19.33■□□□□ 0.68
SSB-201ENST00000260956 KIAA1217Q5T5P2 1943 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 IPO7O95373 1038 aaKnown RBP19.32■□□□□ 0.68
SSB-201ENST00000260956 SLC25A27O95847 323 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 P4HBP07237 508 aaKnown RBP19.32■□□□□ 0.68
SSB-201ENST00000260956 PNMA6AP0CW24 399 aaPredicted RBP19.32■□□□□ 0.68
SSB-201ENST00000260956 CYP2B6P20813 491 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 PON1P27169 355 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 HOXD10P28358 340 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 ADORA2AP29274 412 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 KIF5AQ12840 1032 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 SPA17Q15506 151 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 CCL14Q16627 93 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 KLHDC7AQ5VTJ3 777 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 MIER3Q7Z3K6 550 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 CACNA2D4Q7Z3S7 1137 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 SLC9A9Q8IVB4 645 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 MYCT1Q8N699 235 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 NPLOC4Q8TAT6 608 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 MLXIPQ9HAP2 919 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 PXMP2Q9NR77 195 aa19.32■□□□□ 0.68
SSB-201ENST00000260956 AJAP1Q9UKB5 411 aaPredicted RBP19.32■□□□□ 0.68
SSB-201ENST00000260956 ENC1O14682 589 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 HIP1RO75146 1068 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 PGK2P07205 417 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 ACTN1P12814 892 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 SLC9A1P19634 815 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 RPL13P26373 211 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 RARRES1P49788 294 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 JAM2P57087 298 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 IRF2BP2Q7Z5L9 587 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 NOA1Q8NC60 698 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 SECISBP2LQ93073 1101 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 PNKPQ96T60 521 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 ZSWIM4Q9H7M6 989 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 AGPAT3Q9NRZ7 376 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 FLRT1Q9NZU1 646 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 SLC15A5A6NIM6 579 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 DDX39AO00148 427 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 CLIC2O15247 247 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 CCNE2O96020 404 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 MAPTP10636 758 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 EPB41P11171 864 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 XRCC5P13010 732 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 UCHL3P15374 230 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 EIF2AK2P19525 551 aaKnown RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 TUBB4BP68371 445 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 GFPT1Q06210 699 aaPredicted RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 TRIM32Q13049 653 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 IRF5Q13568 498 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 MTMR1Q13613 665 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 UGCGQ16739 394 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 SLC9C1Q4G0N8 1177 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 PADI6Q6TGC4 694 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 ZNF572Q7Z3I7 529 aaPredicted RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 GPIHBP1Q8IV16 184 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 RAET1EQ8TD07 263 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 ABHD8Q96I13 439 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 TRERF1Q96PN7 1200 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 UBXN6Q9BZV1 441 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
SSB-201ENST00000260956 MYH10P35580 1976 aa19.31■□□□□ 0.68
SSB-201ENST00000260956 ARHGEF35A5YM69 484 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 STRNO43815 780 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 AKR1B10O60218 316 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 ADCY3O60266 1144 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 PRKCIP41743 596 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 PRMT2P55345 433 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 MCCD1P59942 119 aaPredicted RBP19.3■□□□□ 0.68
SSB-201ENST00000260956 CBX1P83916 185 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 MAP2K5Q13163 448 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 KSR1Q8IVT5 923 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 FAM178BQ8IXR5 827 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 TRIB2Q92519 343 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 RNF146Q9NTX7 359 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms