RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 DNAJC7Q99615 494 aa6.34□□□□□ -1.4
TOPBP1-201ENST00000260810 TREHO43280 583 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 BAG3O95817 575 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 KRT2P35908 639 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 OAZ1P54368 228 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 ACTR2P61160 394 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 SSRP1Q08945 709 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 SLC10A6Q3KNW5 377 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 CELF3Q5SZQ8 465 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 GDF6Q6KF10 455 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 SMCR8Q8TEV9 937 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 CPAMD8Q8IZJ3 1885 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 LYSTQ99698 3801 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 ELNP15502 786 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 TRAPPC10P48553 1259 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 NLRP11P59045 1033 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 LACTBP83111 547 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 TMEM150AQ86TG1 271 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 CBWD2Q8IUF1 395 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 TP53INP2Q8IXH6 220 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 ZMIZ2Q8NF64 920 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 MRPS27Q92552 414 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 BHMT2Q9H2M3 363 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 SLC39A2Q9NP94 309 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 SLC45A1Q9Y2W3 748 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 EMSYQ7Z589 1322 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF318Q5VUA4 2279 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 NF1P21359 2839 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 HHLA1C9JL84 531 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 TXKP42681 527 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 HMGN5P82970 282 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 LRRC8AQ8IWT6 810 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 GLIS1Q8NBF1 620 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 HDAC7Q8WUI4 952 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 SMARCAL1Q9NZC9 954 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 EPOPA6NHQ4 379 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 OR52Z1P0C646 297 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 NPTX2P47972 431 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 MARCKSL1P49006 195 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 RPL34P49207 117 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 PRR16Q569H4 304 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 RILPL1Q5EBL4 403 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 GORABQ5T7V8 394 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 CYFIP1Q7L576 1253 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 NIPA1Q7RTP0 329 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 ANKRD23Q86SG2 305 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 VSTM4Q8IW00 320 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 SPATA32Q96LK8 384 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 LXNQ9BS40 222 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 RNF146Q9NTX7 359 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 TMEM59LQ9UK28 342 aa6.33□□□□□ -1.4
TOPBP1-201ENST00000260810 KMT2EQ8IZD2 1858 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 A0A0B4J269 797 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 SOWAHDA6NJG2 315 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 GFRA2O00451 464 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 PAPLNO95428 1278 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 NFIL3Q16649 462 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 ENOX1Q8TC92 643 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 RBM28Q9NW13 759 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 DDX25Q9UHL0 483 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 ARID1BQ8NFD5 2236 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 SASH3O75995 380 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 ANKRD1Q15327 319 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 TDRD10Q5VZ19 366 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 LMBR1Q8WVP7 490 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 GPATCH3Q96I76 525 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 FEM1BQ9UK73 627 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 NOL7Q9UMY1 257 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 HES2Q9Y543 173 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 HCFC2Q9Y5Z7 792 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 CEP295Q9C0D2 2601 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 LRRIQ3A6PVS8 624 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 BEX3Q00994 111 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 ARMCX2Q7L311 632 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF571Q7Z3V5 609 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 DHX58Q96C10 678 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 ATP6V0A4Q9HBG4 840 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 TRIM43BA6NCK2 446 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 NEMFO60524 1076 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 CD1EP15812 388 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 OSBPP22059 807 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 GUCY2FP51841 1108 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 MSLNQ13421 630 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 TNIP1Q15025 636 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 HSCBQ8IWL3 235 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 TRIM43Q96BQ3 446 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 AMNQ9BXJ7 453 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 MTF2Q9Y483 593 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-201ENST00000260810 CXCL11O14625 94 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 CELF2O95319 508 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 RPN1P04843 607 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 HSP90B1P14625 803 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 GUCY2CP25092 1073 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 NUCB2P80303 420 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 SPOPLQ6IQ16 392 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 FOXR2Q6PJQ5 311 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 SFR1Q86XK3 245 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ANKRD13AQ8IZ07 590 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms