RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 SAMD11Q96NU1 681 aa27.89■■■□□ 2.06
LSM7-201ENST00000252622 MMTAG2Q9BU76 263 aaKnown RBP27.89■■■□□ 2.06
LSM7-201ENST00000252622 ELAC1Q9H777 363 aaKnown RBP27.89■■■□□ 2.06
LSM7-201ENST00000252622 CHST12Q9NRB3 414 aa27.89■■■□□ 2.06
LSM7-201ENST00000252622 DDX19AQ9NUU7 478 aaKnown RBP27.89■■■□□ 2.06
LSM7-201ENST00000252622 KIAA1024Q9UPX6 916 aa27.89■■■□□ 2.06
LSM7-201ENST00000252622 HSP90AA1P07900 732 aaKnown RBP27.88■■■□□ 2.05
LSM7-201ENST00000252622 SRGAP2CP0DJJ0 459 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 POU5F1BQ06416 359 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 TFDP1Q14186 410 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 PADI6Q6TGC4 694 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 FIBCD1Q8N539 461 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 RNF149Q8NC42 400 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 ASAP3Q8TDY4 903 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 ZSCAN16Q9H4T2 348 aaPredicted RBP27.88■■■□□ 2.05
LSM7-201ENST00000252622 TMEM161AQ9NX61 479 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 PCDHB7Q9Y5E2 793 aa27.88■■■□□ 2.05
LSM7-201ENST00000252622 CDC25AP30304 524 aa27.87■■■□□ 2.05
LSM7-201ENST00000252622 PHKA2P46019 1235 aa27.87■■■□□ 2.05
LSM7-201ENST00000252622 CATSPER4Q7RTX7 472 aa27.87■■■□□ 2.05
LSM7-201ENST00000252622 IFNLR1Q8IU57 520 aaPredicted RBP27.87■■■□□ 2.05
LSM7-201ENST00000252622 CMTR2Q8IYT2 770 aaKnown RBP27.87■■■□□ 2.05
LSM7-201ENST00000252622 AK8Q96MA6 479 aa27.87■■■□□ 2.05
LSM7-201ENST00000252622 POLR3FQ9H1D9 316 aaPredicted RBP27.87■■■□□ 2.05
LSM7-201ENST00000252622 DACT1Q9NYF0 836 aa27.87■■■□□ 2.05
LSM7-201ENST00000252622 PDIA4P13667 645 aaKnown RBP27.86■■■□□ 2.05
LSM7-201ENST00000252622 CYP11B2P19099 503 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 GLRA2P23416 452 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 PTENP60484 403 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 CAPSQ13938 189 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 BTG3Q14201 252 aaPredicted RBP27.86■■■□□ 2.05
LSM7-201ENST00000252622 HYIQ5T013 277 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 KCTD17Q8N5Z5 321 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 MAFAQ8NHW3 353 aaPredicted RBP27.86■■■□□ 2.05
LSM7-201ENST00000252622 C17orf80Q9BSJ5 609 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 TRAIPQ9BWF2 469 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 NFKBIZQ9BYH8 718 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 BHMT2Q9H2M3 363 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 MTUS1Q9ULD2 1270 aa27.86■■■□□ 2.05
LSM7-201ENST00000252622 RFXAPO00287 272 aa27.85■■■□□ 2.05
LSM7-201ENST00000252622 SLC26A4O43511 780 aa27.85■■■□□ 2.05
LSM7-201ENST00000252622 POU3F3P20264 500 aaPredicted RBP27.85■■■□□ 2.05
LSM7-201ENST00000252622 PCBP1Q15365 356 aaKnown RBP eCLIP27.85■■■□□ 2.05
LSM7-201ENST00000252622 MINDY3Q9H8M7 445 aa27.85■■■□□ 2.05
LSM7-201ENST00000252622 GPRC5CQ9NQ84 441 aa27.85■■■□□ 2.05
LSM7-201ENST00000252622 AGPAT5Q9NUQ2 364 aa27.85■■■□□ 2.05
LSM7-201ENST00000252622 DNM3Q9UQ16 869 aa27.85■■■□□ 2.05
LSM7-201ENST00000252622 PIN4Q9Y237 131 aaKnown RBP27.85■■■□□ 2.05
LSM7-201ENST00000252622 RWDD3Q9Y3V2 267 aa27.85■■■□□ 2.05
LSM7-201ENST00000252622 COL4A4P53420 1690 aaPredicted RBP27.84■■■□□ 2.05
LSM7-201ENST00000252622 A0A0U1RQF3 1178 aa27.84■■■□□ 2.05
LSM7-201ENST00000252622 EYA4O95677 639 aa27.84■■■□□ 2.05
LSM7-201ENST00000252622 LINC00271P0C7V0 271 aa27.84■■■□□ 2.05
LSM7-201ENST00000252622 IBSPP21815 317 aaPredicted RBP27.84■■■□□ 2.05
LSM7-201ENST00000252622 CLP1Q92989 425 aaKnown RBP27.84■■■□□ 2.05
LSM7-201ENST00000252622 CLIC4Q9Y696 253 aa27.84■■■□□ 2.05
LSM7-201ENST00000252622 MYO9BQ13459 2157 aa27.84■■■□□ 2.05
LSM7-201ENST00000252622 COL6A3P12111 3177 aa27.84■■■□□ 2.05
LSM7-201ENST00000252622 RALGAPA2Q2PPJ7 1873 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 E9PMD0 336 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 LPXNO60711 386 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 IGFBP4P22692 258 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 GRB10Q13322 594 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 PTPAQ15257 358 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 EPC2Q52LR7 807 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 FAM102BQ5T8I3 360 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 FAM173BQ6P4H8 233 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 ECHDC2Q86YB7 292 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 TMEM192Q8IY95 271 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 FBXO22Q8NEZ5 403 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 NT5C3AQ9H0P0 336 aa27.83■■■□□ 2.05
LSM7-201ENST00000252622 HOXA2O43364 376 aa27.82■■■□□ 2.04
LSM7-201ENST00000252622 LONP1P36776 959 aaKnown RBP27.82■■■□□ 2.04
LSM7-201ENST00000252622 GATMP50440 423 aa27.82■■■□□ 2.04
LSM7-201ENST00000252622 MAEAQ7L5Y9 396 aa27.82■■■□□ 2.04
LSM7-201ENST00000252622 GDPD5Q8WTR4 605 aa27.82■■■□□ 2.04
LSM7-201ENST00000252622 PNMA5Q96PV4 448 aa27.82■■■□□ 2.04
LSM7-201ENST00000252622 MORC2Q9Y6X9 1032 aaPredicted RBP27.82■■■□□ 2.04
LSM7-201ENST00000252622 GTPBP6O43824 516 aaPredicted RBP27.81■■■□□ 2.04
LSM7-201ENST00000252622 TWF2Q6IBS0 349 aaKnown RBP27.81■■■□□ 2.04
LSM7-201ENST00000252622 KCNK18Q7Z418 384 aa27.81■■■□□ 2.04
LSM7-201ENST00000252622 ZNF598Q86UK7 904 aaKnown RBP27.81■■■□□ 2.04
LSM7-201ENST00000252622 CABP7Q86V35 215 aa27.81■■■□□ 2.04
LSM7-201ENST00000252622 MRPL42Q9Y6G3 142 aaKnown RBP27.81■■■□□ 2.04
LSM7-201ENST00000252622 TRANK1O15050 2925 aa27.81■■■□□ 2.04
LSM7-201ENST00000252622 C5orf67F2Z3F1 127 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 EOMESO95936 686 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 SKIP12755 728 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 RAB27AP51159 221 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 MBTD1Q05BQ5 628 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 ZRSR1Q15695 479 aaKnown RBP27.8■■■□□ 2.04
LSM7-201ENST00000252622 TMEM119Q4V9L6 283 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 PAN2Q504Q3 1202 aaKnown RBP27.8■■■□□ 2.04
LSM7-201ENST00000252622 CDCA2Q69YH5 1023 aaPredicted RBP27.8■■■□□ 2.04
LSM7-201ENST00000252622 CDK5RAP3Q96JB5 506 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 TMEM117Q9H0C3 514 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 RNF19AQ9NV58 838 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 LMCD1Q9NZU5 365 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 MTCH2Q9Y6C9 303 aa27.8■■■□□ 2.04
LSM7-201ENST00000252622 NLRC5Q86WI3 1866 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms