RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 CEP131Q9UPN4 1083 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 PCDHB7Q9Y5E2 793 aa11.66□□□□□ -0.54
VPS50-201ENST00000251739 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 M0R2N6 131 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 PSMD10O75832 226 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 FGF18O76093 207 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 OATP04181 439 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 FGFR1P11362 822 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 USP11P51784 963 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 ERVFC1P60507 584 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 PRKCEQ02156 737 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 TOB2Q14106 344 aaPredicted RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 TARBP2Q15633 366 aaKnown RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 DUSP6Q16828 381 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 CSPP1Q1MSJ5 1256 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 RNF135Q8IUD6 432 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 METTL13Q8N6R0 699 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 SUSD6Q92537 303 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 MBOAT7Q96N66 472 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 CEP89Q96ST8 783 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 PPP1R16BQ96T49 567 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 UPF3BQ9BZI7 483 aaKnown RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 TMEM117Q9H0C3 514 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 NCOA5Q9HCD5 579 aaKnown RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 AAASQ9NRG9 546 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 DISC1Q9NRI5 854 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 TYW1Q9NV66 732 aaKnown RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 BARX2Q9UMQ3 279 aaPredicted RBP11.65□□□□□ -0.54
VPS50-201ENST00000251739 LZTS1Q9Y250 596 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 PCDHB12Q9Y5F1 795 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 DENND4AQ7Z401 1863 aa11.65□□□□□ -0.54
VPS50-201ENST00000251739 CYP3A7-CYP3A51PA0A087WV96 503 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 FSD2A1L4K1 749 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 EPB41L2O43491 1005 aaKnown RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 PPFIA3O75145 1194 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 ZMYND10O75800 440 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 STBD1O95210 358 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 ATF7P17544 494 aaPredicted RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 LAG3P18627 525 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 EIF4BP23588 611 aaKnown RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 CYP3A7P24462 503 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 SFNP31947 248 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 GPC3P51654 580 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 JAK3P52333 1124 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 PLCB3Q01970 1234 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 Q4G0T1 1027 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 CLLU1OSQ5K130 101 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 TMEM184AQ6ZMB5 413 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 LRRC71Q8N4P6 559 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 DAGLBQ8NCG7 672 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 RDM1Q8NG50 284 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 CCDC136Q96JN2 1154 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 CASD1Q96PB1 797 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 UNC45AQ9H3U1 944 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 ATP6V0A4Q9HBG4 840 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 MUTYHQ9UIF7 546 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 RABGEF1Q9UJ41 708 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 USP15Q9Y4E8 981 aaPredicted RBP11.64□□□□□ -0.55
VPS50-201ENST00000251739 MYO10Q9HD67 2058 aa11.64□□□□□ -0.55
VPS50-201ENST00000251739 IGKV6-21A0A0C4DH24 114 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 HOXA2O43364 376 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 HRO43593 1189 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 GAS7O60861 476 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 REC8O95072 547 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 PSMA5P28066 241 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
VPS50-201ENST00000251739 DRP2Q13474 957 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 LRCH2Q5VUJ6 765 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 PDE12Q6L8Q7 609 aaKnown RBP11.63□□□□□ -0.55
VPS50-201ENST00000251739 HFE2Q6ZVN8 426 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 RBM23Q86U06 439 aaKnown RBP11.63□□□□□ -0.55
VPS50-201ENST00000251739 ECHDC2Q86YB7 292 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 THNSL1Q8IYQ7 743 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 ETNPPLQ8TBG4 499 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 TBCKQ8TEA7 893 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 MRPS27Q92552 414 aaKnown RBP11.63□□□□□ -0.55
VPS50-201ENST00000251739 GJA10Q969M2 543 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 KCNH6Q9H252 994 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 TLE6Q9H808 572 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 AKT3Q9Y243 479 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 SAMM50Q9Y512 469 aa11.63□□□□□ -0.55
VPS50-201ENST00000251739 A0A0U1RQF3 1178 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 BHMG1C9JSJ3 638 aaPredicted RBP11.62□□□□□ -0.55
VPS50-201ENST00000251739 TDP2O95551 362 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 IBSPP21815 317 aaPredicted RBP11.62□□□□□ -0.55
VPS50-201ENST00000251739 FECHP22830 423 aa11.62□□□□□ -0.55
VPS50-201ENST00000251739 TMOD1P28289 359 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms