RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 NCAPG2Q86XI2 1143 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 VPS52Q8N1B4 723 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 ZCRB1Q8TBF4 217 aaKnown RBP19.67■□□□□ 0.74
PTPN12-201ENST00000248594 MYO5AQ9Y4I1 1855 aaKnown RBP19.67■□□□□ 0.74
PTPN12-201ENST00000248594 HNRNPCP07910 306 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■□□□ 12.2
PTPN12-201ENST00000248594 FUT2Q10981 343 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 TBC1D16Q8TBP0 767 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 CTNNBL1Q8WYA6 563 aaPredicted RBP19.67■□□□□ 0.74
PTPN12-201ENST00000248594 VCX3BQ9H321 246 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 VCX3AQ9NNX9 186 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.67■□□□□ 0.74
PTPN12-201ENST00000248594 NAGPAQ9UK23 515 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 POTEMA6NI47 508 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 ZSCAN9O15535 394 aaPredicted RBP19.67■□□□□ 0.74
PTPN12-201ENST00000248594 TROAPQ12815 778 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 KYNUQ16719 465 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 OR52E8Q6IFG1 317 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 DSTYKQ6XUX3 929 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 PLEKHG4BQ96PX9 1271 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 RMI1Q9H9A7 625 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 CCDC87Q9NVE4 849 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 CTTNBP2NLQ9P2B4 639 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 TCRBV5S4A2TA0A5A2 114 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 ABCD1P33897 745 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 CPA2P48052 419 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 TMED2Q15363 201 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 SEC23AQ15436 765 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 CENPPQ6IPU0 288 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 ASRGL1Q7L266 308 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 HIC2Q96JB3 615 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 SLAIN2Q9P270 581 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 ASIC3Q9UHC3 531 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 SERPINA10Q9UK55 444 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 CNTNAP5Q8WYK1 1306 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 LRRC37A3O60309 1634 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 USP17L12C9JPN9 530 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 USP17L21D6R901 530 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 VHLP40337 213 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 TTC1Q99614 292 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 HEG1Q9ULI3 1381 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 MYH2Q9UKX2 1941 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 CFAP69A5D8W1 941 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 ANKRD63C9JTQ0 380 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 TOM1O60784 492 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 ZBTB16Q05516 673 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 CALCOCO2Q13137 446 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 LBRQ14739 615 aaKnown RBP19.66■□□□□ 0.74
PTPN12-201ENST00000248594 KPNB1Q14974 876 aaKnown RBP19.66■□□□□ 0.74
PTPN12-201ENST00000248594 ZRSR2Q15696 482 aaKnown RBP19.66■□□□□ 0.74
PTPN12-201ENST00000248594 CYP4F22Q6NT55 531 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 COL23A1Q86Y22 540 aaPredicted RBP19.66■□□□□ 0.74
PTPN12-201ENST00000248594 GLYCTKQ8IVS8 523 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 C4orf32Q8N8J7 132 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 ALG13Q9NP73 1137 aaKnown RBP19.66■□□□□ 0.74
PTPN12-201ENST00000248594 SLC4A7Q9Y6M7 1214 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 RPTORQ8N122 1335 aa19.66■□□□□ 0.74
PTPN12-201ENST00000248594 TXNDC9O14530 226 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 ZNF189O75820 626 aaPredicted RBP19.65■□□□□ 0.74
PTPN12-201ENST00000248594 IRGCQ6NXR0 463 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 VPS36Q86VN1 386 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 CRAMP1Q96RY5 1269 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 ZNF711Q9Y462 761 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 RIPK2O43353 540 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 SUPT3HO75486 399 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 OR52Z1P0C646 297 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 NEK3P51956 506 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 OVGP1Q12889 678 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.65■□□□□ 0.74
PTPN12-201ENST00000248594 MYOCDQ8IZQ8 938 aa19.65■□□□□ 0.74
PTPN12-201ENST00000248594 PFASO15067 1338 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 A6NJR5 290 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 RASA1P20936 1047 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 CALML3P27482 149 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 GYG1P46976 350 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 TRAPPC10P48553 1259 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 TAF1BQ53T94 588 aaPredicted RBP19.64■□□□□ 0.74
PTPN12-201ENST00000248594 PDCD7Q8N8D1 485 aaKnown RBP19.64■□□□□ 0.74
PTPN12-201ENST00000248594 ZFAND2BQ8WV99 257 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 DDX12PQ92771 950 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 LRCH1Q9Y2L9 728 aa19.64■□□□□ 0.74
PTPN12-201ENST00000248594 FUT4P22083 530 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 GALCP54803 685 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 KLRC3Q07444 240 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 CNPY1Q3B7I2 92 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 C1QTNF12Q5T7M4 302 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 MAP3K7O43318 606 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 ACADSP16219 412 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 DESP17661 470 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 CDR2Q01850 454 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 ANKLE1Q8NAG6 615 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 MKNK1Q9BUB5 465 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 FGFBP2Q9BYJ0 223 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 UBN1Q9NPG3 1134 aa19.64■□□□□ 0.73
PTPN12-201ENST00000248594 PCDH11XQ9BZA7 1347 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 SERPINB3P29508 390 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 FKBP3Q00688 224 aaKnown RBP19.63■□□□□ 0.73
PTPN12-201ENST00000248594 KCNH2Q12809 1159 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 AGGF1Q8N302 714 aaeCLIP19.63■□□□□ 0.73
PTPN12-201ENST00000248594 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 IQCDQ96DY2 449 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms