RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 BICD1Q96G01 975 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 MYO3BQ8WXR4 1341 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 DLATP10515 647 aaKnown RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 FLT3P36888 993 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 TRAF1Q13077 416 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 ARHGAP27Q6ZUM4 889 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 ARHGEF26Q96DR7 871 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 STK33Q9BYT3 514 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 ACP6Q9NPH0 428 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 TESPA1A2RU30 521 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 HMGB1P1B2RPK0 211 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 CCDC188H7C350 402 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 SLC16A3O15427 465 aaKnown RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 PEX3P56589 373 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 MAP2K1Q02750 393 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 DACT2Q5SW24 774 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 SEL1L2Q5TEA6 688 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 MOXD1Q6UVY6 613 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 OTOP1Q7RTM1 612 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 PACS2Q86VP3 889 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 IQCKQ8N0W5 287 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 LNX1Q8TBB1 728 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 DYDC1Q8WWB3 177 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 MKL1Q969V6 931 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 POLR3CQ9BUI4 534 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 RAB17Q9H0T7 212 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 APEX2Q9UBZ4 518 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 RASAL2Q9UJF2 1139 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 VAV3Q9UKW4 847 aa13.65□□□□□ -0.22
RAB3IP-201ENST00000247833 CCDC121Q6ZUS5 278 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 LDHDQ86WU2 507 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 PALB2Q86YC2 1186 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 UBL4BQ8N7F7 174 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 SAAL1Q96ER3 474 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 CABS1Q96KC9 395 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 NEUROG2Q9H2A3 272 aa13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 DNAJC17Q9NVM6 304 aaKnown RBP13.65□□□□□ -0.23
RAB3IP-201ENST00000247833 DDX60LQ5H9U9 1706 aaKnown RBP13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 SLC16A4O15374 487 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 GTF2A1P52655 376 aaPredicted RBP13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 HDLBPQ00341 1268 aaKnown RBP13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 MTMR3Q13615 1198 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 RPUSD2Q8IZ73 545 aaKnown RBP13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 NR2E1Q9Y466 385 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 MDH1P40925 334 aaKnown RBP13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 BFSP1Q12934 665 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 ZNF720Q7Z2F6 126 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 GMCL1Q96IK5 515 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 CCT8L2Q96SF2 557 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 CBWD1Q9BRT8 395 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 GPRC5CQ9NQ84 441 aa13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
RAB3IP-201ENST00000247833 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 HGSO14964 777 aaPredicted RBP13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 IFNAR2P48551 515 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 MXI1P50539 228 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 DLG4P78352 724 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 SNX1Q13596 522 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 RRP1BQ14684 758 aaKnown RBP13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 ZNF572Q7Z3I7 529 aaPredicted RBP13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 NT5DC3Q86UY8 548 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 BTBD6Q96KE9 485 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 CCDC114Q96M63 670 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 SH3GL2Q99962 352 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 DENND2CQ68D51 928 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 KAT5Q92993 513 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 TMEM39BQ9GZU3 492 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 MYH7BA7E2Y1 1941 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 IGSF9BQ9UPX0 1349 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 C1orf186Q6ZWK4 172 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 MGARPQ8TDB4 240 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 OLFML3Q9NRN5 406 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 FAM114A2Q9NRY5 505 aa13.63□□□□□ -0.23
RAB3IP-201ENST00000247833 A6NNZ2 444 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 VAMP7P51809 220 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 TUBB8Q3ZCM7 444 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 ACTRT1Q8TDG2 376 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 HSD17B14Q9BPX1 270 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 GLIS2Q9BZE0 524 aaPredicted RBP13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 SIX2Q9NPC8 291 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 SUCLA2Q9P2R7 463 aaPredicted RBP13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 ALG6Q9Y672 507 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 KCNJ1P48048 391 aa13.62□□□□□ -0.23
RAB3IP-201ENST00000247833 TRIP13Q15645 432 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms