RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 COLGALT1Q8NBJ5 622 aa18.1■□□□□ 0.49
CLPP-201ENST00000245816 MSLNLQ96KJ4 702 aa18.1■□□□□ 0.49
CLPP-201ENST00000245816 FDXACB1Q9BRP7 624 aaPredicted RBP18.1■□□□□ 0.49
CLPP-201ENST00000245816 ELAC1Q9H777 363 aaKnown RBP18.1■□□□□ 0.49
CLPP-201ENST00000245816 RGL1Q9NZL6 768 aa18.1■□□□□ 0.49
CLPP-201ENST00000245816 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
CLPP-201ENST00000245816 MEIS3P2A8K0S8 358 aa18.09■□□□□ 0.49
CLPP-201ENST00000245816 DDX11L8A8MPP1 907 aa18.09■□□□□ 0.49
CLPP-201ENST00000245816 TRAPPC10P48553 1259 aa18.09■□□□□ 0.49
CLPP-201ENST00000245816 TBC1D8BQ0IIM8 1120 aa18.09■□□□□ 0.49
CLPP-201ENST00000245816 NAALADL2Q58DX5 795 aa18.09■□□□□ 0.49
CLPP-201ENST00000245816 EP400NLQ6ZTU2 488 aa18.09■□□□□ 0.49
CLPP-201ENST00000245816 C19orf67A6NJJ6 358 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 PI4K2BG5E9Z4 385 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 FSCN2O14926 492 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 MBTPS2O43462 519 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 MARCH6O60337 910 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 CD2BP2O95400 341 aaKnown RBP18.08■□□□□ 0.48
CLPP-201ENST00000245816 U2AF2P26368 475 aaKnown RBP eCLIP18.08■□□□□ 0.48
CLPP-201ENST00000245816 PSMC5P62195 406 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 ZP2Q05996 745 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 RBM23Q86U06 439 aaKnown RBP18.08■□□□□ 0.48
CLPP-201ENST00000245816 GJD3Q8N144 294 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 MAP7D2Q96T17 732 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 LRFN3Q9BTN0 628 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 MINDY3Q9H8M7 445 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 ATP6V0A4Q9HBG4 840 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 IFT122Q9HBG6 1241 aa18.08■□□□□ 0.48
CLPP-201ENST00000245816 FAM86C2PA6NEL3 165 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 PER2O15055 1255 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 B4GALT3O60512 393 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 FGF18O76093 207 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 TMOD1P28289 359 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 FOSBP53539 338 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 KCNC3Q14003 757 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 NOSTRINQ8IVI9 506 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 DYDC2Q96IM9 177 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 TMEM117Q9H0C3 514 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 CYP26B1Q9NR63 512 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 SUCLA2Q9P2R7 463 aaPredicted RBP18.07■□□□□ 0.48
CLPP-201ENST00000245816 PCDHA12Q9UN75 941 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 PPME1Q9Y570 386 aa18.07■□□□□ 0.48
CLPP-201ENST00000245816 A0A087WWV3 80 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 A0A0U1RQF3 1178 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 NEMFO60524 1076 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 SLITRK3O94933 977 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 P4HBP07237 508 aaKnown RBP18.06■□□□□ 0.48
CLPP-201ENST00000245816 QARSP47897 775 aaKnown RBP18.06■□□□□ 0.48
CLPP-201ENST00000245816 NRIP1P48552 1158 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 GUCY1B3Q02153 619 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 EPHA7Q15375 998 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 NLRP7Q8WX94 980 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 LPPQ93052 612 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 MTMR9Q96QG7 549 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 DHX33Q9H6R0 707 aaKnown RBP18.06■□□□□ 0.48
CLPP-201ENST00000245816 XPNPEP1Q9NQW7 623 aa18.06■□□□□ 0.48
CLPP-201ENST00000245816 AFF1P51825 1210 aaKnown RBP18.05■□□□□ 0.48
CLPP-201ENST00000245816 CUL4AQ13619 759 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 GNL2Q13823 731 aaKnown RBP18.05■□□□□ 0.48
CLPP-201ENST00000245816 CTTNQ14247 550 aaKnown RBP18.05■□□□□ 0.48
CLPP-201ENST00000245816 SMAD2Q15796 467 aaKnown RBP18.05■□□□□ 0.48
CLPP-201ENST00000245816 CALCRLQ16602 461 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 LONRF3Q496Y0 759 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 ODR4Q5SWX8 454 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 RHPN2Q8IUC4 686 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 EFHBQ8N7U6 833 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 HELQQ8TDG4 1101 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 TMEM143Q96AN5 459 aa18.05■□□□□ 0.48
CLPP-201ENST00000245816 BMP2KQ9NSY1 1161 aaPredicted RBP18.05■□□□□ 0.48
CLPP-201ENST00000245816 BARX2Q9UMQ3 279 aaPredicted RBP18.05■□□□□ 0.48
CLPP-201ENST00000245816 HIDE1A8MVS5 230 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 EYA4O95677 639 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 HOXA11P31270 313 aaPredicted RBP18.04■□□□□ 0.48
CLPP-201ENST00000245816 CDC42EP1Q00587 391 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 PLCB3Q01970 1234 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 UBXN11Q5T124 520 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 KCNT2Q6UVM3 1135 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 TMEM173Q86WV6 379 aaPredicted RBP18.04■□□□□ 0.48
CLPP-201ENST00000245816 C4orf19Q8IY42 314 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 EXOC8Q8IYI6 725 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 RNF169Q8NCN4 708 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 FEZF2Q8TBJ5 459 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 BCL7CQ8WUZ0 217 aaPredicted RBP18.04■□□□□ 0.48
CLPP-201ENST00000245816 PRPF31Q8WWY3 499 aaKnown RBP18.04■□□□□ 0.48
CLPP-201ENST00000245816 HSD17B14Q9BPX1 270 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 LXNQ9BS40 222 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 TMEM60Q9H2L4 133 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 NOL7Q9UMY1 257 aaKnown RBP18.04■□□□□ 0.48
CLPP-201ENST00000245816 SMC3Q9UQE7 1217 aa18.04■□□□□ 0.48
CLPP-201ENST00000245816 ARID2Q68CP9 1835 aa18.03■□□□□ 0.48
CLPP-201ENST00000245816 NT5C1B-RDH14C9J2C7 533 aa18.03■□□□□ 0.48
CLPP-201ENST00000245816 NCK2O43639 380 aa18.03■□□□□ 0.48
CLPP-201ENST00000245816 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
CLPP-201ENST00000245816 GJB2P29033 226 aa18.03■□□□□ 0.48
CLPP-201ENST00000245816 PHKA2P46019 1235 aa18.03■□□□□ 0.48
CLPP-201ENST00000245816 CYP4A11Q02928 519 aa18.03■□□□□ 0.48
CLPP-201ENST00000245816 PUS10Q3MIT2 529 aaKnown RBP18.03■□□□□ 0.48
CLPP-201ENST00000245816 SPOUT1Q5T280 376 aaKnown RBP18.03■□□□□ 0.48
CLPP-201ENST00000245816 NCAPH2Q6IBW4 605 aa18.03■□□□□ 0.48
CLPP-201ENST00000245816 JPH2Q9BR39 696 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms