RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 DEFB132Q7Z7B7 95 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 CTAGE3PQ8IX95 158 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 USP38Q8NB14 1042 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 MTMR8Q96EF0 704 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 CEP63Q96MT8 703 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 ACCSQ96QU6 501 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 FAM153AQ9UHL3 310 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 C3P01024 1663 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 IPO5O00410 1097 aaKnown RBP9.97□□□□□ -0.81
COL21A1-201ENST00000244728 GAP43P17677 238 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 RASSF2P50749 326 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 CYB5D1Q6P9G0 228 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 WDR59Q6PJI9 974 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 SCARA5Q6ZMJ2 495 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 FAM160B2Q86V87 743 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 C7orf31Q8N865 590 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 MDM1Q8TC05 714 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 SGSM3Q96HU1 749 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 VCXQ9H320 206 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 ZNF148Q9UQR1 794 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 LUC7L3O95232 432 aaKnown RBP9.96□□□□□ -0.81
COL21A1-201ENST00000244728 PDHBP11177 359 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 ACTN1P12814 892 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 ZNF746Q6NUN9 644 aaPredicted RBP9.96□□□□□ -0.81
COL21A1-201ENST00000244728 TMED8Q6PL24 325 aaPredicted RBP9.96□□□□□ -0.81
COL21A1-201ENST00000244728 PADI6Q6TGC4 694 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 LRIG3Q6UXM1 1119 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 P3H4Q92791 437 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 CELF4Q9BZC1 486 aaKnown RBP9.96□□□□□ -0.81
COL21A1-201ENST00000244728 RNF146Q9NTX7 359 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 MON2Q7Z3U7 1717 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 A0A087X0T9 212 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 TCRBV5S4A2TA0A5A2 114 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 CCDC160A6NGH7 325 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 FAM228BP0C875 321 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 ATP2A2P16615 1042 aaKnown RBP9.96□□□□□ -0.81
COL21A1-201ENST00000244728 HMGCS2P54868 508 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 SLMAPQ14BN4 828 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 TRIP13Q15645 432 aaPredicted RBP9.96□□□□□ -0.81
COL21A1-201ENST00000244728 NAB2Q15742 525 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 CYP4F22Q6NT55 531 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 DCAF4Q8WV16 495 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 ANKS1AQ92625 1134 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 ADPGKQ9BRR6 497 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 RIOK1Q9BRS2 568 aaKnown RBP9.96□□□□□ -0.81
COL21A1-201ENST00000244728 FAM167BQ9BTA0 163 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 SLITRK6Q9H5Y7 841 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 KBTBD4Q9NVX7 518 aa9.96□□□□□ -0.81
COL21A1-201ENST00000244728 PEAK1Q9H792 1746 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 TNNC2P02585 160 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 NMT1P30419 496 aaKnown RBP9.96□□□□□ -0.82
COL21A1-201ENST00000244728 TTMPQ5BVD1 217 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 CYFIP1Q7L576 1253 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 LDHDQ86WU2 507 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 CAVIN3Q969G5 261 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 SPDL1Q96EA4 605 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 XPO6Q96QU8 1125 aaKnown RBP9.96□□□□□ -0.82
COL21A1-201ENST00000244728 CRAMP1Q96RY5 1269 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 TMEM39BQ9GZU3 492 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 ISCUQ9H1K1 167 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 VCPKMTQ9H867 229 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 FBXO28Q9NVF7 368 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 LRRD1A4D1F6 860 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 POC1B-GALNT4F8VUJ3 575 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 ECEL1O95672 775 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 NR3C1P04150 777 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 GYS1P13807 737 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 ATF2P15336 505 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 CHN1P15882 459 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 SBK1Q52WX2 424 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 FIGNQ5HY92 759 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 CCDC89Q8N998 374 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 SPATA20Q8TB22 786 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 CCHCR1Q8TD31 782 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 TLR10Q9BXR5 811 aa9.96□□□□□ -0.82
COL21A1-201ENST00000244728 FAM49AQ9H0Q0 323 aaPredicted RBP9.96□□□□□ -0.82
COL21A1-201ENST00000244728 FAM205AQ6ZU69 1335 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 SMIM24O75264 130 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 FGFR2P21802 821 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 MFAP3P55082 362 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 IL9RQ01113 521 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 AP3B2Q13367 1082 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 MEA1Q16626 185 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 ANKRD20A3Q5VUR7 823 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 FAM47EQ6ZV65 393 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 GLYCTKQ8IVS8 523 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 PRPF38AQ8NAV1 312 aaKnown RBP9.95□□□□□ -0.82
COL21A1-201ENST00000244728 CERKQ8TCT0 537 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL21A1-201ENST00000244728 SAAL1Q96ER3 474 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 MED15Q96RN5 788 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 FOXP2O15409 715 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 SGO2Q562F6 1265 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 SWSAP1Q6NVH7 229 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 ZNF449Q6P9G9 518 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 PPP4R3CPQ6ZMV5 832 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 FAM149B1Q96BN6 582 aa9.95□□□□□ -0.82
COL21A1-201ENST00000244728 DUSP9Q99956 384 aaKnown RBP9.95□□□□□ -0.82
COL21A1-201ENST00000244728 DNAJC12Q9UKB3 198 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms