RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 NTPCRQ9BSD7 190 aaKnown RBP25.4■■□□□ 1.66
MSX2-201ENST00000239243 PAGR1Q9BTK6 254 aa25.4■■□□□ 1.66
MSX2-201ENST00000239243 SEPT9Q9UHD8 586 aaPredicted RBP25.4■■□□□ 1.66
MSX2-201ENST00000239243 FHOD1Q9Y613 1164 aa25.4■■□□□ 1.66
MSX2-201ENST00000239243 TACC1O75410 805 aa25.39■■□□□ 1.66
MSX2-201ENST00000239243 ANXA13P27216 316 aa25.39■■□□□ 1.66
MSX2-201ENST00000239243 SP4Q02446 784 aa25.39■■□□□ 1.66
MSX2-201ENST00000239243 GFPT1Q06210 699 aaPredicted RBP25.39■■□□□ 1.66
MSX2-201ENST00000239243 SLC18A3Q16572 532 aa25.39■■□□□ 1.66
MSX2-201ENST00000239243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.39■■□□□ 1.66
MSX2-201ENST00000239243 SIX2Q9NPC8 291 aa25.39■■□□□ 1.66
MSX2-201ENST00000239243 DOCK5Q9H7D0 1870 aa25.39■■□□□ 1.65
MSX2-201ENST00000239243 CCDC169A6NNP5 214 aa25.39■■□□□ 1.65
MSX2-201ENST00000239243 ATG7O95352 703 aa25.39■■□□□ 1.65
MSX2-201ENST00000239243 NPTX2P47972 431 aa25.39■■□□□ 1.65
MSX2-201ENST00000239243 AMPD2Q01433 879 aa25.39■■□□□ 1.65
MSX2-201ENST00000239243 KMT5AQ9NQR1 393 aa25.39■■□□□ 1.65
MSX2-201ENST00000239243 CYP26B1Q9NR63 512 aa25.39■■□□□ 1.65
MSX2-201ENST00000239243 MACROD2A1Z1Q3 448 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 N4BP1O75113 896 aaKnown RBP25.38■■□□□ 1.65
MSX2-201ENST00000239243 OSBPP22059 807 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 RSRC2Q7L4I2 434 aaKnown RBP25.38■■□□□ 1.65
MSX2-201ENST00000239243 CYFIP1Q7L576 1253 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 MAP4K3Q8IVH8 894 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 TMEM161BQ8NDZ6 487 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 OPTNQ96CV9 577 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 ATP6V0A4Q9HBG4 840 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 TBX20Q9UMR3 447 aa25.38■■□□□ 1.65
MSX2-201ENST00000239243 IQCA1LA6NCM1 817 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 H0YCG3 227 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 CHMP4BP1P59074 171 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 PAPD7Q5XG87 772 aaKnown RBP25.37■■□□□ 1.65
MSX2-201ENST00000239243 SEPT14Q6ZU15 432 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 GPR161Q8N6U8 529 aaKnown RBP25.37■■□□□ 1.65
MSX2-201ENST00000239243 RABGGTAQ92696 567 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 ALS2CR12Q96Q35 445 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 HSPBP1Q9NZL4 362 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 SCN4AP35499 1836 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 GLTPD2A6NH11 291 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 TGFB3P10600 412 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 RFX1P22670 979 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 PRKCIP41743 596 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 MYL7Q01449 175 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 SP2Q02086 613 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 ARID5AQ03989 594 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 CETN1Q12798 172 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 C10orf76Q5T2E6 689 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 MOB2Q70IA6 237 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 TRAPPC11Q7Z392 1133 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 ZNF302Q9NR11 478 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 PDLIM7Q9NR12 457 aa25.37■■□□□ 1.65
MSX2-201ENST00000239243 MAFBQ9Y5Q3 323 aaPredicted RBP25.37■■□□□ 1.65
MSX2-201ENST00000239243 P4HA2O15460 535 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 JAM2P57087 298 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 NEDD9Q14511 834 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 IRF2BP2Q7Z5L9 587 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 RNF10Q8N5U6 811 aaKnown RBP25.36■■□□□ 1.65
MSX2-201ENST00000239243 ARGLU1Q9NWB6 273 aaPredicted RBP25.36■■□□□ 1.65
MSX2-201ENST00000239243 SAR1BQ9Y6B6 198 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 DUSP10Q9Y6W6 482 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 SOWAHBA6NEL2 793 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 CNMDO75829 334 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 IFT74Q96LB3 600 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 CBWD1Q9BRT8 395 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 PCIF1Q9H4Z3 704 aa25.36■■□□□ 1.65
MSX2-201ENST00000239243 MYH9P35579 1960 aaKnown RBP25.36■■□□□ 1.65
MSX2-201ENST00000239243 SYNGAP1Q96PV0 1343 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 DENND3A2RUS2 1198 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 PEX10O60683 326 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 FERP16591 822 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 SCP2P22307 547 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 VAMP7P51809 220 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 TEX35Q5T0J7 233 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 VPS36Q86VN1 386 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 RDH13Q8NBN7 331 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.35■■□□□ 1.65
MSX2-201ENST00000239243 JRKLQ9Y4A0 524 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 TRIM49P0CI25 452 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 TRIM49CP0CI26 452 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 STAT1P42224 750 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 CBWD6Q4V339 395 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 CBWD3Q5JTY5 395 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 CBWD5Q5RIA9 395 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 FBXO38Q6PIJ6 1188 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 PNMA8AQ86V59 439 aaPredicted RBP25.35■■□□□ 1.65
MSX2-201ENST00000239243 GPIHBP1Q8IV16 184 aa25.35■■□□□ 1.65
MSX2-201ENST00000239243 OATP04181 439 aa25.34■■□□□ 1.65
MSX2-201ENST00000239243 H2AFXP16104 143 aaPredicted RBP25.34■■□□□ 1.65
MSX2-201ENST00000239243 UBA1P22314 1058 aaKnown RBP25.34■■□□□ 1.65
MSX2-201ENST00000239243 EAPPQ56P03 285 aaPredicted RBP25.34■■□□□ 1.65
MSX2-201ENST00000239243 IQCEQ6IPM2 695 aa25.34■■□□□ 1.65
MSX2-201ENST00000239243 STK33Q9BYT3 514 aa25.34■■□□□ 1.65
MSX2-201ENST00000239243 TAF1DQ9H5J8 278 aaPredicted RBP25.34■■□□□ 1.65
MSX2-201ENST00000239243 CTAGE15A4D2H0 777 aa25.33■■□□□ 1.65
MSX2-201ENST00000239243 ATP1A1P05023 1023 aaKnown RBP25.33■■□□□ 1.65
MSX2-201ENST00000239243 CTAGE8P0CG41 777 aa25.33■■□□□ 1.65
MSX2-201ENST00000239243 FSTL1Q12841 308 aa25.33■■□□□ 1.65
MSX2-201ENST00000239243 CTAGE6Q86UF2 777 aa25.33■■□□□ 1.65
MSX2-201ENST00000239243 CTAGE4Q8IX94 777 aa25.33■■□□□ 1.65
MSX2-201ENST00000239243 INTS2Q9H0H0 1204 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms