RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 KLC3Q6P597 504 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 PARP9Q8IXQ6 854 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 CEP95Q96GE4 821 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 RBM41Q96IZ5 413 aaKnown RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 PCSK1NQ9UHG2 260 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 SLC12A6Q9UHW9 1150 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 APOBEC2Q9Y235 224 aaKnown RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 GRID2IPA4D2P6 1211 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 KRT10P13645 584 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 ABCD1P33897 745 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 MDM2Q00987 491 aaPredicted RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 LRRC23Q53EV4 343 aaPredicted RBP14.29□□□□□ -0.12
NEK4-201ENST00000233027 DCAF4Q8WV16 495 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 LRRC1Q9BTT6 524 aa14.29□□□□□ -0.12
NEK4-201ENST00000233027 BRAFP15056 766 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 FAM160B2Q86V87 743 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 BCORL1Q5H9F3 1711 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 TYW5A2RUC4 315 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 TDP2O95551 362 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 VAMP7P51809 220 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 GPS1Q13098 491 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 WDR75Q8IWA0 830 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 TRPV6Q9H1D0 765 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 GTSE1Q9NYZ3 720 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 SLFN12LQ6IEE8 588 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 STOX1Q6ZVD7 989 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 SAAL1Q96ER3 474 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 RAVER2Q9HCJ3 691 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 ANKARQ7Z5J8 1434 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 CHUKO15111 745 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 ZNF667Q5HYK9 610 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 CCDC137Q6PK04 289 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 ZBED8Q8IZ13 594 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 XXYLT1Q8NBI6 393 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 UPF3AQ9H1J1 476 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 CAPN11Q9UMQ6 739 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 HAUS5O94927 633 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 PDIA2Q13087 525 aaKnown RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 GRM4Q14833 912 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 SURF1Q15526 300 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 TAF1BQ53T94 588 aaPredicted RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 ANKRD40Q6AI12 368 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 SLC13A1Q9BZW2 595 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 AP5M1Q9H0R1 490 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 ATP6V0A4Q9HBG4 840 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 KLHL8Q9P2G9 620 aaPredicted RBP14.28□□□□□ -0.12
NEK4-201ENST00000233027 TRIM10Q9UDY6 481 aa14.28□□□□□ -0.12
NEK4-201ENST00000233027 PPP1R12AO14974 1030 aaPredicted RBP14.27□□□□□ -0.12
NEK4-201ENST00000233027 BNIP3LO60238 219 aa14.27□□□□□ -0.12
NEK4-201ENST00000233027 ZSCAN20P17040 1043 aaPredicted RBP14.27□□□□□ -0.12
NEK4-201ENST00000233027 EPHB1P54762 984 aa14.27□□□□□ -0.12
NEK4-201ENST00000233027 NCAPHQ15003 741 aa14.27□□□□□ -0.12
NEK4-201ENST00000233027 PPM1NQ8N819 430 aa14.27□□□□□ -0.12
NEK4-201ENST00000233027 PRMT1Q99873 361 aaKnown RBP14.27□□□□□ -0.12
NEK4-201ENST00000233027 EXOC8Q8IYI6 725 aa14.27□□□□□ -0.12
NEK4-201ENST00000233027 ZNF668Q96K58 619 aaPredicted RBP14.27□□□□□ -0.12
NEK4-201ENST00000233027 FAM161BQ96MY7 647 aa14.27□□□□□ -0.12
NEK4-201ENST00000233027 LRRC37BQ96QE4 947 aa14.27□□□□□ -0.12
NEK4-201ENST00000233027 DCP1AQ9NPI6 582 aaPredicted RBP14.27□□□□□ -0.12
NEK4-201ENST00000233027 UBE4BO95155 1302 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 FMR1Q06787 632 aaKnown RBP eCLIP14.27□□□□□ -0.13
NEK4-201ENST00000233027 ZNF699Q32M78 642 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 ANGPTL8Q6UXH0 198 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 GLYCTKQ8IVS8 523 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 FAM49AQ9H0Q0 323 aaPredicted RBP14.27□□□□□ -0.13
NEK4-201ENST00000233027 AMACRQ9UHK6 382 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 MID2Q9UJV3 735 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 PVALEFA0A1B0GWK0 134 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 TRIM49P0CI25 452 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 TRIM49CP0CI26 452 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 CCZ1BP86790 482 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 CCZ1P86791 482 aaPredicted RBP14.27□□□□□ -0.13
NEK4-201ENST00000233027 PDXDC1Q6P996 788 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 RNF139Q8WU17 664 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 HACD3Q9P035 362 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 MINPP1Q9UNW1 487 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 KRT14P02533 472 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 DSTYKQ6XUX3 929 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 STAG2Q8N3U4 1231 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 CHP1Q99653 195 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 CPDO75976 1380 aa14.27□□□□□ -0.13
NEK4-201ENST00000233027 WDR19Q8NEZ3 1342 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CREB3O43889 395 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 KRT27Q7Z3Y8 459 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 ADGRF4Q8IZF3 695 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 TRIM15Q9C019 465 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 ALG13Q9NP73 1137 aaKnown RBP14.26□□□□□ -0.13
NEK4-201ENST00000233027 NEO1Q92859 1461 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CRKP46108 304 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 JAK3P52333 1124 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 KLHL38Q2WGJ6 581 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 DPY19L2Q6NUT2 758 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 RNF217Q8TC41 542 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 NCLNQ969V3 563 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms