RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 NAPAP54920 295 aa22.39■■□□□ 1.17
SNX3-201ENST00000230085 Q3C1V9 767 aa22.39■■□□□ 1.17
SNX3-201ENST00000230085 HYIQ5T013 277 aa22.39■■□□□ 1.17
SNX3-201ENST00000230085 NLRP14Q86W24 1093 aa22.39■■□□□ 1.17
SNX3-201ENST00000230085 LRRC45Q96CN5 670 aa22.39■■□□□ 1.17
SNX3-201ENST00000230085 H0YGN5 161 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 FAM153BP0C7A2 387 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 BCRP11274 1271 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 GUCY2DQ02846 1103 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 ACTN3Q08043 901 aaPredicted RBP22.38■■□□□ 1.17
SNX3-201ENST00000230085 TMEM132BQ14DG7 1078 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 TMEM266Q2M3C6 531 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 LETM2Q2VYF4 491 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 FAM153CQ494X1 144 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 AGBL2Q5U5Z8 902 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 TRIM59Q8IWR1 403 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 PLCD3Q8N3E9 789 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 CCT8L2Q96SF2 557 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 JMJD4Q9H9V9 463 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 SLC38A10Q9HBR0 1119 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 FAM153AQ9UHL3 310 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 NFS1Q9Y697 457 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 SMCO2A6NFE2 343 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 C5orf60A6NFR6 353 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 PALMO75781 387 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 TECP42680 631 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 MATR3P43243 847 aaKnown RBP eCLIP22.38■■□□□ 1.17
SNX3-201ENST00000230085 IFI16Q16666 785 aaKnown RBP22.38■■□□□ 1.17
SNX3-201ENST00000230085 MYOCDQ8IZQ8 938 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 REPS2Q8NFH8 660 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 SEC14L1Q92503 715 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 EHD2Q9NZN4 543 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 SLC12A6Q9UHW9 1150 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 RABGAP1Q9Y3P9 1069 aa22.38■■□□□ 1.17
SNX3-201ENST00000230085 BZW2Q9Y6E2 419 aaKnown RBP22.38■■□□□ 1.17
SNX3-201ENST00000230085 ECHS1P30084 290 aa22.37■■□□□ 1.17
SNX3-201ENST00000230085 SETQ01105 290 aaPredicted RBP22.37■■□□□ 1.17
SNX3-201ENST00000230085 PLS1Q14651 629 aa22.37■■□□□ 1.17
SNX3-201ENST00000230085 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
SNX3-201ENST00000230085 REXO1Q8N1G1 1221 aaKnown RBP22.37■■□□□ 1.17
SNX3-201ENST00000230085 SH2D3CQ8N5H7 860 aa22.37■■□□□ 1.17
SNX3-201ENST00000230085 GTF3C2Q8WUA4 911 aaPredicted RBP22.37■■□□□ 1.17
SNX3-201ENST00000230085 RIOX1Q9H6W3 641 aa22.37■■□□□ 1.17
SNX3-201ENST00000230085 SMARCAL1Q9NZC9 954 aa22.37■■□□□ 1.17
SNX3-201ENST00000230085 CAPN7Q9Y6W3 813 aa22.37■■□□□ 1.17
SNX3-201ENST00000230085 CCDC188H7C350 402 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 ZBED4O75132 1171 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 RASSF9O75901 435 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 USP11P51784 963 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 ERVK-9P63128 1117 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 MTMR3Q13615 1198 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 FAM110CQ1W6H9 321 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 FBXW10Q5XX13 1052 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 CCDC174Q6PII3 467 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 PPP4R3CPQ6ZMV5 832 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 RUFY4Q6ZNE9 571 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 MAGEC3Q8TD91 643 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 TBCKQ8TEA7 893 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 MS4A14Q96JA4 679 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 RANBP17Q9H2T7 1088 aaKnown RBP22.36■■□□□ 1.17
SNX3-201ENST00000230085 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
SNX3-201ENST00000230085 ZNF214Q9UL59 606 aaPredicted RBP22.36■■□□□ 1.17
SNX3-201ENST00000230085 SAMM50Q9Y512 469 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 SMCHD1A6NHR9 2005 aa22.36■■□□□ 1.17
SNX3-201ENST00000230085 ECM2O94769 699 aaPredicted RBP22.35■■□□□ 1.17
SNX3-201ENST00000230085 KLRC1P26715 233 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 CALCRLQ16602 461 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 PPP1R18Q6NYC8 613 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 GPRC5AQ8NFJ5 357 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 DNAJC19Q96DA6 116 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 EEF2KMTQ96G04 330 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 MORF4L1Q9UBU8 362 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 NENFQ9UMX5 172 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 CTDP1Q9Y5B0 961 aaPredicted RBP22.35■■□□□ 1.17
SNX3-201ENST00000230085 A0A0G2JMZ2 1700 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 GPR25O00155 361 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 ZNF536O15090 1300 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 HSPA1AP0DMV8 641 aaKnown RBP22.35■■□□□ 1.17
SNX3-201ENST00000230085 HSPA1BP0DMV9 641 aaKnown RBP22.35■■□□□ 1.17
SNX3-201ENST00000230085 SPATC1LQ9H0A9 340 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 GANQ9H2C0 597 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 FBXL5Q9UKA1 691 aa22.35■■□□□ 1.17
SNX3-201ENST00000230085 A0A0A6YYK5 440 aaPredicted RBP22.34■■□□□ 1.17
SNX3-201ENST00000230085 GOLGA6L10A6NI86 522 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 CHUKO15111 745 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 RAD51CO43502 376 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 BUB1O43683 1085 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 FDX1P10109 184 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 GUCY1A3Q02108 690 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 EDRF1Q3B7T1 1238 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 TDRD12Q587J7 1177 aaKnown RBP22.34■■□□□ 1.17
SNX3-201ENST00000230085 HPS3Q969F9 1004 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 AGBL1Q96MI9 1066 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 PIGSQ96S52 555 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 KRT12Q99456 494 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 INTUQ9ULD6 942 aa22.34■■□□□ 1.17
SNX3-201ENST00000230085 TAL1P17542 331 aaPredicted RBP22.33■■□□□ 1.17
SNX3-201ENST00000230085 MNAT1P51948 309 aa22.33■■□□□ 1.17
SNX3-201ENST00000230085 RASGEF1CQ8N431 466 aa22.33■■□□□ 1.17
SNX3-201ENST00000230085 LRRC57Q8N9N7 239 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms