RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 UPF2Q9HAU5 1272 aaKnown RBP15.89■□□□□ 0.13
GPN3-201ENST00000228827 RNF19AQ9NV58 838 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 PIN4Q9Y237 131 aaKnown RBP15.89■□□□□ 0.13
GPN3-201ENST00000228827 TTC3P53804 2025 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 MYH9P35579 1960 aaKnown RBP15.88■□□□□ 0.13
GPN3-201ENST00000228827 H3BQ06 376 aaPredicted RBP15.88■□□□□ 0.13
GPN3-201ENST00000228827 SRGAP2CP0DJJ0 459 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 LAMTOR4Q0VGL1 99 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 CAMK1Q14012 370 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 LONRF3Q496Y0 759 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 NAALADL2Q58DX5 795 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 TWF2Q6IBS0 349 aaKnown RBP15.88■□□□□ 0.13
GPN3-201ENST00000228827 NOSTRINQ8IVI9 506 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 EXOC8Q8IYI6 725 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 ABI1Q8IZP0 508 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 POF1BQ8WVV4 589 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 PSPC1Q8WXF1 523 aaKnown RBP15.88■□□□□ 0.13
GPN3-201ENST00000228827 MTRQ99707 1265 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 TMEM117Q9H0C3 514 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 IGFLR1Q9H665 355 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 IFT122Q9HBG6 1241 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 CLDND1Q9NY35 253 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 DACT1Q9NYF0 836 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 PPME1Q9Y570 386 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 PCDHB12Q9Y5F1 795 aa15.88■□□□□ 0.13
GPN3-201ENST00000228827 A0A0U1RQF3 1178 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 HOXA2O43364 376 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 GTF2F1P35269 517 aaKnown RBP eCLIP15.87■□□□□ 0.13
GPN3-201ENST00000228827 IRS1P35568 1242 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 TECP42680 631 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 HYAL1Q12794 435 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 NBR1Q14596 966 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 CLLU1OSQ5K130 101 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 TTC38Q5R3I4 469 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 THNSL1Q8IYQ7 743 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 COLGALT1Q8NBJ5 622 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 NEK9Q8TD19 979 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 HELQQ8TDG4 1101 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 PIGOQ8TEQ8 1089 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 TCP11Q8WWU5 503 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 CCDC43Q96MW1 224 aaKnown RBP15.87■□□□□ 0.13
GPN3-201ENST00000228827 CWH43Q9H720 699 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 AAASQ9NRG9 546 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 PCDHGC5Q9Y5F6 944 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 EVPLQ92817 2033 aa15.87■□□□□ 0.13
GPN3-201ENST00000228827 LYPLA2O95372 231 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 CD2BP2O95400 341 aaKnown RBP15.86■□□□□ 0.13
GPN3-201ENST00000228827 OR52Z1P0C646 297 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 ATF7P17544 494 aaPredicted RBP15.86■□□□□ 0.13
GPN3-201ENST00000228827 LEXMQ3ZCV2 418 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 LRRC55Q6ZSA7 311 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 ZNF598Q86UK7 904 aaKnown RBP15.86■□□□□ 0.13
GPN3-201ENST00000228827 RNF149Q8NC42 400 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.86■□□□□ 0.13
GPN3-201ENST00000228827 LPPQ93052 612 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
GPN3-201ENST00000228827 MINDY3Q9H8M7 445 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 XPNPEP1Q9NQW7 623 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 CHST12Q9NRB3 414 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 LOXHD1Q8IVV2 1947 aa15.86■□□□□ 0.13
GPN3-201ENST00000228827 GAS2O43903 313 aaKnown RBP15.85■□□□□ 0.13
GPN3-201ENST00000228827 FGF18O76093 207 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 LAG3P18627 525 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 PBX3P40426 434 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 PHKA2P46019 1235 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 ADGRD2Q7Z7M1 963 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 LRRC43Q8N309 656 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 MICAL1Q8TDZ2 1067 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 TMX3Q96JJ7 454 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 ANKEF1Q9NU02 776 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 NOL7Q9UMY1 257 aaKnown RBP15.85■□□□□ 0.13
GPN3-201ENST00000228827 RALGAPA2Q2PPJ7 1873 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 NLRC5Q86WI3 1866 aa15.85■□□□□ 0.13
GPN3-201ENST00000228827 LINC01565O15544 149 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 MED24O75448 989 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 EOMESO95936 686 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 SPATA31C1P0DKV0 1188 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 RARRES1P49788 294 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 CLUL1Q15846 466 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 PTCRAQ6ISU1 281 aaPredicted RBP15.84■□□□□ 0.13
GPN3-201ENST00000228827 MAEAQ7L5Y9 396 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 SRGAP1Q7Z6B7 1085 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 RBM23Q86U06 439 aaKnown RBP15.84■□□□□ 0.13
GPN3-201ENST00000228827 CATSPER3Q86XQ3 398 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 ASAP3Q8TDY4 903 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 ASAP2O43150 1006 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 USO1O60763 962 aaKnown RBP15.84■□□□□ 0.13
GPN3-201ENST00000228827 DGAT1O75907 488 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 IL9P15248 144 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 MCTP1Q6DN14 999 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 KCNT2Q6UVM3 1135 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 ERMNQ8TAM6 284 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 ZNF558Q96NG5 402 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 FAM105AQ9NUU6 356 aa15.84■□□□□ 0.13
GPN3-201ENST00000228827 MEIS3P2A8K0S8 358 aa15.83■□□□□ 0.12
GPN3-201ENST00000228827 U2AF2P26368 475 aaKnown RBP eCLIP15.83■□□□□ 0.12
GPN3-201ENST00000228827 NRIP1P48552 1158 aa15.83■□□□□ 0.12
GPN3-201ENST00000228827 TRAPPC10P48553 1259 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms