RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ARMCX2Q7L311 632 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 HESX1Q9UBX0 185 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 TRIM17Q9Y577 477 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 BTAF1O14981 1849 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 HBP1O60381 514 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 KRT31Q15323 416 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 RNF34Q969K3 372 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 NACA2Q9H009 215 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 C10orf71Q711Q0 1435 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 LDHAP00338 332 aaKnown RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 SETSIPP0DME0 302 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 GCLMP48507 274 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 ALDH5A1P51649 535 aaPredicted RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 FMR1Q06787 632 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 GOLGA8FQ08AF8 430 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 GOLGA8DPQ0D2H9 430 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 IFRD2Q12894 506 aaPredicted RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 PAK2Q13177 524 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 RIOX2Q8IUF8 465 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 DESI2Q9BSY9 194 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 MED10Q9BTT4 135 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 KATNAL1Q9BW62 490 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 TOPORSQ9NS56 1045 aaPredicted RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 TYW1Q9NV66 732 aaKnown RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 C5P01031 1676 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 LPXNO60711 386 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 CD58P19256 250 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 EMC2Q15006 297 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 WHAMMP3Q1A5X7 153 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 KIAA1841Q6NSI8 718 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 RNF180Q86T96 592 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 MRPL4Q9BYD3 311 aaKnown RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 IFIH1Q9BYX4 1025 aaKnown RBP10.17□□□□□ -0.78
CCDC113-201ENST00000219299 ABHD16BQ9H3Z7 469 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 THAP9Q9H5L6 903 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 NRBP1Q9UHY1 535 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 USTQ9Y2C2 406 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 ARFGEF2Q9Y6D5 1785 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 BTBD19C9JJ37 291 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 KIF3CO14782 793 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 MAGEB2O15479 319 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 NOL3O60936 208 aaKnown RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CIB2O75838 187 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 PTK2Q05397 1052 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 EFCAB12Q6NXP0 572 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CCDC110Q8TBZ0 833 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 MIPOL1Q8TD10 442 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 MED4Q9NPJ6 270 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CYP39A1Q9NYL5 469 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 MTUS1Q9ULD2 1270 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 PCDHB4Q9Y5E5 795 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CAPN7Q9Y6W3 813 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 MEIS2O14770 477 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 ETF1P62495 437 aaKnown RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 TCP11X2Q5H9J9 407 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 ILDR2Q71H61 639 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CCDC117Q8IWD4 279 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CCDC97Q96F63 343 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 ZBED2Q9BTP6 218 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 SSX2IPQ9Y2D8 614 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 PDE4DIPQ5VU43 2346 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 MYH14Q7Z406 1995 aaKnown RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 ABL1P00519 1130 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CPT1AP50416 773 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 IQCDQ96DY2 449 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 UBE2TQ9NPD8 197 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 SNCAIPQ9Y6H5 919 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 COL22A1Q8NFW1 1626 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 ZBBXA8MT70 800 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 OATP04181 439 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 MFAP3P55082 362 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 RNASE9P60153 205 aaKnown RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CCDC38Q502W7 563 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 ZC2HC1CQ53FD0 456 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 CEP85LQ5SZL2 805 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 SCARA5Q6ZMJ2 495 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 POLR3CQ9BUI4 534 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-201ENST00000219299 RIPK3Q9Y572 518 aa10.16□□□□□ -0.78
CCDC113-201ENST00000219299 TGFB3P10600 412 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 EFNA5P52803 228 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 MXD4Q14582 209 aaPredicted RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 KCNB1Q14721 858 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 METTL7BQ6UX53 244 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 SND1Q7KZF4 910 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 FAM71BQ8TC56 605 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 PSMB7Q99436 277 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 C7orf25Q9BPX7 421 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 GPRC5CQ9NQ84 441 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 ODF2LQ9ULJ1 636 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 PIN4Q9Y237 131 aaKnown RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 ROBO3Q96MS0 1386 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 ACTN4O43707 911 aaKnown RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 PDE6CP51160 858 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 SPRYD7Q5W111 196 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 TRIM50Q86XT4 487 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms