RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Sval3Q76I99 144 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ckap2lQ7TS74 745 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 4932429P05RikA2ADI4 785 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Zfp956Q3UZY6 572 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Tbc1d22bQ80VE5 505 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Pcdhb7Q8CDY9 829 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Pus7lQ8CE46 702 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Tspyl4Q8VD63 406 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 MycbpQ9EQS3 103 aa13.31□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Olfr1354E9Q5G9 310 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Dpcr1Q3TNW5 500 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ifnl2Q4VK74 193 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 FntaQ61239 377 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Rassf6Q80UQ2 353 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 NcaphQ8C156 731 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Cdkl2Q9QUK0 568 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Gbp4A4UUI3 631 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Slc39a2G3X943 309 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Rbp3P49194 1234 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Gm13103Q4VAD2 491 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Unc5clQ6R653 518 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Dnaaf2Q8BPI1 814 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Rnf31Q924T7 1066 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 3830403N18RikQ9D6C3 208 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Myoz2Q9JJW5 264 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Gm8897L7N294 181 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Asprv1Q09PK2 339 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Bcap29Q61334 240 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Phactr3Q8BYK5 558 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Slc35f6Q8VE96 372 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Pabpc1lA2A5N3 607 aaKnown RBP13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Serpinb3aG3X9V8 387 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Sept1P42209 366 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Git1Q68FF6 770 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ttc23Q8CHY7 488 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Serpina3nQ91WP6 418 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 1700109H08RikQ9D9C0 210 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Mtmr1Q9Z2C4 669 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Akr1b10G5E895 316 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Soat2O88908 525 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 GalcP54818 684 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ccdc85bQ6PDY0 202 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Acot5Q6Q2Z6 421 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Afg3l1Q920A7 789 aaKnown RBP13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Foxp4Q9DBY0 795 aaKnown RBP13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Serpina3kP07759 418 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Uhmk1P97343 419 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 S100a13P97352 98 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Rab3ipQ68EF0 428 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Armc12Q80X86 340 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Thnsl1Q8BH55 747 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Krt16Q9Z2K1 469 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Krt1P04104 637 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ush1gQ80T11 461 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Pnpt1Q8K1R3 783 aaKnown RBP13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Tada3Q8R0L9 432 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Stard7Q8R1R3 373 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Eps8l1Q8R5F8 716 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Nrbp1Q99J45 535 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ubxn11Q9D572 484 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Rbp7Q9EPC5 134 aa13.3□□□□□ -0.28
Col6a3-208ENSMUST00000188587 AatkQ80YE4 1365 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Usp10P52479 792 aaKnown RBP13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Pcgf5Q3UK78 256 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Sept8Q8CHH9 429 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ing3Q8VEK6 421 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 AdarQ99MU3 1178 aaKnown RBP13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Gm36028A0A0U1RPM1 299 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Tmem132bF7BAB2 1078 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Psma3O70435 255 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Syt2P46097 422 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Nek1P51954 1203 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ece2Q80Z60 881 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 PolrmtQ8BKF1 1207 aaKnown RBP13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Unc45bQ8CGY6 931 aaKnown RBP13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 ParvbQ9ES46 365 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ppp1r3fQ9JIG4 799 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Carmil3Q3UFQ8 1375 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ppargc1aO70343 797 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Fam167aQ6P1G6 215 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Fbxo9Q8BK06 437 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ccdc90bQ8C3X2 256 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Atp5oQ9DB20 213 aaKnown RBP13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Haus3Q8QZX2 570 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Nova2D3YVV7 556 aaKnown RBP13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Heatr9Q5QNV8 569 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 RgmbQ7TQ33 436 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 P3h2Q8CG71 703 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Zmat2Q9CPW7 199 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 FopnlQ9CZS3 174 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Cnot8Q9D8X5 292 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Rlbp1Q9Z275 317 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ccdc62E9PVD1 701 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ppp1r12bQ8BG95 976 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Phka2Q8BWJ3 1235 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Msi2Q920Q6 346 aaKnown RBP13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Snx5Q9D8U8 404 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Abcg8Q9DBM0 673 aa13.29□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Prr5lA2AVJ5 370 aa13.28□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Cyp3a25O09158 503 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms