RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Tfdp1Q08639 410 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Zfp957Q3UT76 567 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Asap3Q5U464 904 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Atp13a4Q5XF90 1193 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ano5Q75UR0 904 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Prpf31Q8CCF0 499 aaKnown RBP8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Olfr397Q8VEZ6 315 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Cep72Q9D3R3 646 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 1700016D06RikQ9DAA5 166 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Mettl7bQ9DD20 244 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Syt5Q9R0N5 386 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Klra10Q9R1G6 266 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tnfsf13bQ9WU72 309 aa8.18□□□□□ -1.1
Usp40-204ENSMUST00000187758 Gm42688A0A0R3P9D1 673 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Rnaseh1O70338 285 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Dync1i1O88485 628 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Acsl1P41216 699 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ccr1P51675 355 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Kcnj4P52189 445 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Senp1P59110 640 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Col9a2Q07643 688 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Mcf2lQ64096 1149 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ints8Q80V86 995 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Cwf19l2Q8BG79 887 aaKnown RBP8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tmem161bQ8C2L6 487 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ccdc142Q8CAI1 738 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Mettl24Q8CCB5 363 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Mamdc2Q8CG85 686 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Bclaf1Q8K019 919 aaKnown RBP8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tas1r1Q99PG6 842 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ifi35Q9D8C4 286 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Mmrn2A6H6E2 943 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Gm21973F6WEZ7 68 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tlk2O55047 718 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Nptx2O70340 429 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tmod1P49813 359 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Clcn3P51791 818 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ccpg1Q640L3 753 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Sass6Q80UK7 654 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 RragaQ80X95 313 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Gpr180Q8BPS4 441 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 NkrfQ8BY02 690 aaKnown RBP8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Vmn1r191Q8K4D0 298 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Erp44Q9D1Q6 406 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tmem206Q9D771 350 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tlr5Q9JLF7 859 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ercc4Q9QZD4 917 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Krt28A6BLY7 462 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Serpinb3aG3X9V8 387 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Calb1P12658 261 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Pou3f3P31361 497 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Edem3Q2HXL6 931 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 LbpQ61805 481 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Hdac10Q6P3E7 666 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ankfy1Q810B6 1169 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Slc9b1Q8C0X2 565 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 MafaQ8CF90 359 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 AagabQ8R2R3 316 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ddx27Q921N6 760 aaKnown RBP8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Prmt7Q922X9 692 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Olig1Q9JKN5 260 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Akt3Q9WUA6 479 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Slc12a7Q9WVL3 1083 aa8.17□□□□□ -1.1
Usp40-204ENSMUST00000187758 Col4a3Q9QZS0 1669 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 A0A286YCQ6 122 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Efna5O08543 228 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Cyth3O08967 399 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Phka1P18826 1241 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 SarsP26638 512 aaKnown RBP8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Drp2Q05AA6 957 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 SobpQ0P5V2 864 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tgfbrap1Q3UR70 860 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Specc1Q5SXY1 1067 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Mybpc2Q5XKE0 1136 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Panx2Q6IMP4 677 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Rhbdf1Q6PIX5 856 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Epn1Q80VP1 575 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Phldb2Q8K1N2 1249 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 GldcQ91W43 1025 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Nol7Q9D7Z3 254 aaKnown RBP8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Fthl17aQ9DAX0 182 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Gyg1Q9R062 333 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Nr1i3O35627 358 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 EpoP07321 192 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Serpinc1P32261 465 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Cyp11b1Q3TG86 501 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 R3hdm4Q4VBF2 262 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Srrm1Q52KI8 946 aaKnown RBP8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 GartQ64737 1010 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Gemin4Q6P6L6 1058 aaKnown RBP8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Slc38a7Q8BWH0 463 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Usp20Q8C6M1 916 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Ino80bQ99PT3 375 aaKnown RBP8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Desi2Q9D291 194 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Upf1Q9EPU0 1124 aaKnown RBP8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Cnga3Q9JJZ8 631 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Atad5Q4QY64 1826 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Tnfrsf11aO35305 625 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 NostrinQ6WKZ7 506 aa8.16□□□□□ -1.1
Usp40-204ENSMUST00000187758 Q8BGN9 141 aa8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms