RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Tatdn3Q3U1C6 294 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Carmil2Q3V3V9 1296 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Pnma5Q5DTT8 618 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Cyp7b1Q60991 507 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Ccna1Q61456 421 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Mcm7Q61881 719 aaKnown RBP17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Ppp2r5aQ6PD03 486 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Dusp9Q7TNL7 452 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Tnpo1Q8BFY9 898 aaKnown RBP17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Tbc1d10cQ8C9V1 444 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Pak2Q8CIN4 524 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 NaspQ99MD9 773 aaKnown RBP17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 NenfQ9CQ45 171 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Susd3Q9D176 269 aa17.08■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Taf1Q80UV9 1891 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 PtenO08586 403 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 PargO88622 969 aaKnown RBP17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Idh1O88844 414 aaKnown RBP17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Sox1P53783 391 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 DhpsQ3TXU5 369 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 AarsQ8BGQ7 968 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Rps6kc1Q8BLK9 1056 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Rint1Q8BZ36 792 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Tspan8Q8R3G9 235 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Kdm4cQ8VCD7 1054 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Tnpo2Q99LG2 887 aaKnown RBP17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Trim11Q99PQ2 467 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Iqca1Q9CUL5 857 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Hic2Q9JLZ6 619 aaKnown RBP17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Szt2A2A9C3 3431 aa17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Myo5aQ99104 1853 aaKnown RBP17.07■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 G430095P16RikE9Q913 147 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Gm5134E9QAB5 671 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Rfx1P48377 963 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Setd4P58467 439 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 DeptorQ570Y9 409 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Git1Q68FF6 770 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Gpbp1Q6NXH3 473 aaKnown RBP17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Tmc3Q7TQ69 1130 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Zfp113Q8C689 439 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Fam20aQ8CID3 541 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Olfr1352Q8VGX5 309 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Trub2Q91WG3 331 aaKnown RBP17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Atp6v0a4Q920R6 833 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Mfsd5Q921Y4 450 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Bbox1Q924Y0 387 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Krtap5-3Q9D226 196 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Ppp2r3cQ9JK24 453 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Fbxo17Q9QZM8 286 aa17.06■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Cep350E9Q309 3095 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Gm45194A0A140LJG2 572 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Bmp8aP34821 399 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 DsppP97399 934 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 ArvcfP98203 962 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Oas1fQ14AZ4 364 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Gtf3c3Q3TMP1 882 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Gm28047Q3US59 414 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Usp13Q5BKP2 858 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Klra7Q60654 280 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Nrg1Q6DR99 700 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 HomezQ80W88 542 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Znf473Q8BI67 892 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Btnl9Q8BJE2 536 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Ttc39bQ8BYY4 617 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Tdrd7Q8K1H1 1086 aaKnown RBP17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 LpxnQ99N69 386 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Krt23Q99PS0 422 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Micu3Q9CTY5 523 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Smyd3Q9CWR2 428 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Spatc1lQ9D9W0 342 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 B4galt4Q9JJ04 344 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Stx6Q9JKK1 255 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Eya4Q9Z191 616 aa17.05■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Fam205aA2APU8 1308 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Slc6a16A0A1L1SR47 742 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Zfp882E9Q4R4 555 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Nr1i2O54915 431 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 mt-Co3P00416 261 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Edem3Q2HXL6 931 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Upf3aQ3ULJ3 422 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Capn13Q3UW68 665 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Ccdc85bQ6PDY0 202 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Mrgprb8Q7TN51 330 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Proser3Q7TSA6 634 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 R3hcc1Q8BSI6 488 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Camkk1Q8VBY2 505 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Olfr390Q8VEZ7 311 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Dqx1Q924H9 718 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Mrps25Q9D125 171 aaKnown RBP17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Nkx2-4Q9EQM3 354 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Arl6ip4Q9JM93 229 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Myh11O08638 1972 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Col4a4Q9QZR9 1682 aa17.04■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 1700017N19RikA0A087WPJ1 469 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Krt36B1AQ75 473 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Gimd1E9PW74 217 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Vmn2r17E9PYF5 849 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Arhgap6O54834 987 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Got1P05201 413 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Hexim2Q3TVI4 313 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms