RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Cyp2s1Q9DBX6 501 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 PorcnQ9JJJ7 461 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Tlr2Q9QUN7 784 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Twf2Q9Z0P5 349 aaKnown RBP28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Mettl1Q9Z120 268 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Col9a2Q07643 688 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Lrig2Q52KR2 1054 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Hspa4Q61316 841 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Ano5Q75UR0 904 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Ctu1Q99J10 420 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Gtpbp4Q99ME9 634 aaKnown RBP28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Trim10Q9WUH5 489 aa28.04■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Il2rbP16297 539 aa28.03■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Rapgef1Q3UHC1 1224 aa28.03■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Dlg4Q62108 724 aa28.03■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Luc7lQ9CYI4 371 aaKnown RBP28.03■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Vps33aQ9D2N9 598 aa28.03■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Cnga3Q9JJZ8 631 aa28.03■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Astn1Q61137 1302 aa28.03■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Olfr67F8VPJ8 320 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Apba3O88888 571 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 EdnrbP48302 442 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Lpar1P61793 364 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 GclcP97494 637 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Sh3gl1Q62419 368 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Gba2Q69ZF3 918 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Ppme1Q8BVQ5 386 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Serpina9Q9D7D2 418 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Acot6Q32Q92 419 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Ncoa7Q6DFV7 943 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 RubcnQ80U62 956 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Tmco3Q8BH01 678 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Wrap53Q8VC51 532 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Nudt5Q9JKX6 218 aa28.02■■■□□ 2.08
Tpm1-216ENSMUST00000113707 Gm4841E9QAA8 417 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Clk2O35491 499 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Morf4l1P60762 362 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Cyp3a11Q64459 504 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Srd5a1Q68FF9 255 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Styk1Q6J9G1 429 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Lrig3Q6P1C6 1117 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Zfp251Q6PCX8 632 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Ccdc169Q8BXX9 214 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Tada3Q8R0L9 432 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Olig1Q9JKN5 260 aa28.01■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Gad1P48318 593 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Ppp3caP63328 521 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 NeblQ0II04 452 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Lrrc14bQ3UJB3 510 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Taf3Q5HZG4 932 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Krt15Q61414 452 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Snd1Q78PY7 910 aaKnown RBP28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Q91Z58 1206 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Vmn2r63E9Q0K5 859 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Gm9268E9Q0M3 861 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Vmn2r62K7N712 859 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 PrkcshO08795 521 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Prom1O54990 867 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Nptx2O70340 429 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 P01734 135 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 rp9P97762 213 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Klra6Q60653 266 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Lmo3Q8BZL8 145 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Rrp1bQ91YK2 724 aaKnown RBP28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 PdgfdQ925I7 370 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Tbx20Q9ES03 445 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Limd1Q9QXD8 668 aa28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Celf2Q9Z0H4 508 aaKnown RBP28■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Zfp408H7BX78 710 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Spryd7Q3TFQ1 196 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Skap1Q3UUV5 355 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Slain1Q68FF7 579 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Tdp1Q8BJ37 609 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 6820408C15RikQ8BJX2 354 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Calml4Q91WQ9 153 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Znf687Q9D2D7 1237 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Ankef1Q9D2J7 775 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Tnfsf13bQ9WU72 309 aa27.99■■■□□ 2.07
Tpm1-216ENSMUST00000113707 MafP54843 370 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Pafah1b1P63005 410 aaKnown RBP27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 DeptorQ570Y9 409 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 1700129C05RikQ9CQ77 218 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Atad5Q4QY64 1826 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Odf2A3KGV1 830 aaKnown RBP27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 EpoP07321 192 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Mfsd14aP70187 490 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Gjb6P70689 261 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Cep112Q5PR68 954 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Fmnl3Q6ZPF4 1028 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Q8BGN9 141 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Dusp19Q8K4T5 220 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Ttc1Q91Z38 292 aa27.98■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Gm1758F6VZZ1 202 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Phactr1Q2M3X8 580 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 OsbpQ3B7Z2 805 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Miga1Q4QQM5 600 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Atp6v0d2Q80SY3 350 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Olfml3Q8BK62 406 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 EpgnQ924X1 152 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Elp3Q9CZX0 547 aa27.97■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms