RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Usp31E9Q6Y8 1344 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Ccdc170D3YXL0 722 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Mpp3O88910 568 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Krt8P11679 490 aaKnown RBP10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Lgr6Q3UVD5 967 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Brip1Q5SXJ3 1174 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Krt12Q64291 487 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Retreg2Q6NS82 541 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Slc9c1Q6UJY2 1175 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 E330017A01RikQ8BU47 192 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Rint1Q8BZ36 792 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Vps37bQ8R0J7 285 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Akr1c14Q91WT7 323 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Tfr2Q9JKX3 798 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Rasgrp1Q9Z1S3 795 aa10.29□□□□□ -0.76
Trim9-201ENSMUST00000110520 Aknad1E9Q8N6 675 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Kcnu1O54982 1121 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Krt35Q497I4 455 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Tshz1Q5DTH5 1084 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Zmynd10Q99ML0 440 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Ppp1r3aQ99MR9 1089 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Pramef12Q9D2F1 463 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Lmnb1P14733 588 aaKnown RBP10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Ugt1a9Q62452 528 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Gcfc2Q8BKT3 769 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Scfd2Q8BTY8 684 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Fam53cQ8BXQ8 393 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Bnip3lQ9Z2F7 218 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Alpk3Q924C5 1678 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Ppfia4B8QI36 1187 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Hoxa11P31311 313 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Psmc5P62196 406 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 SbdsP70122 250 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Ddx49Q4FZF3 480 aaKnown RBP10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Q6PD19 689 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Fnbp1Q80TY0 616 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Tbc1d22bQ80VE5 505 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Tldc1Q8K0P3 455 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 AagabQ8R2R3 316 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Lrrc14Q8VC16 493 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Ivns1abpQ920Q8 642 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Psma8Q9CWH6 250 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Rabl3Q9D4V7 236 aa10.28□□□□□ -0.76
Trim9-201ENSMUST00000110520 Mmrn2A6H6E2 943 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Atf2P16951 487 aaKnown RBP10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Nedd1P33215 660 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Stmn4P63042 189 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Bend4P86174 541 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Tmtc1Q3UV71 942 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Stk38lQ7TSE6 464 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Siglec10Q80ZE3 688 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Spata21Q8BHW6 681 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Ttc16Q8C1F5 767 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Kat5Q8CHK4 513 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Cse1lQ9ERK4 971 aaKnown RBP10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Krt17Q9QWL7 433 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Cacna2d3Q9Z1L5 1091 aa10.27□□□□□ -0.76
Trim9-201ENSMUST00000110520 Cyp4f40G3UW81 524 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Usp17ldG5E8G2 545 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Usp17lcG5E8I7 545 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Serpinb6eI7HJI3 429 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 AfmO89020 608 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Eno1P17182 434 aaKnown RBP10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Tsta3P23591 321 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Hsd17b1P51656 344 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 AaasP58742 546 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Atp8b1Q148W0 1251 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Cfap52Q5F201 620 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Dph1Q5NCQ5 438 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Phf20Q8BLG0 1010 aaKnown RBP10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Tbc1d10cQ8C9V1 444 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Polr3fQ921X6 316 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Bcs1lQ9CZP5 418 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Serpina9Q9D7D2 418 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Ddx24Q9ESV0 857 aaKnown RBP10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Slc40a1Q9JHI9 570 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Usp14Q9JMA1 493 aaKnown RBP10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Flt1P35969 1333 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Gm10436L7N1Y3 520 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Nr1i3O35627 358 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 DffaO54786 331 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Cd44P15379 778 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Smad1P70340 465 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 G3bp2P97379 482 aaKnown RBP10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Psmd1Q3TXS7 953 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Mysm1Q69Z66 819 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Ssxb10Q6XAR7 170 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Usp38Q8BW70 1042 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Slc9b1Q8C0X2 565 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Shtn1Q8K2Q9 631 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Col23a1Q8K4G2 532 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Rhobtb2Q91V93 728 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Serpinb3bQ9D1Q5 387 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Cpb2Q9JHH6 422 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Caln1Q9JJG7 219 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Txnrd2Q9JLT4 524 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Tll2Q9WVM6 1012 aa10.27□□□□□ -0.77
Trim9-201ENSMUST00000110520 Atp2c2A7L9Z8 944 aa10.26□□□□□ -0.77
Trim9-201ENSMUST00000110520 Sema3fO88632 785 aa10.26□□□□□ -0.77
Trim9-201ENSMUST00000110520 SpoplQ2M2N2 392 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms