RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Panx2Q6IMP4 677 aa23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 Usp6nlQ80XC3 819 aa23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 Snx17Q8BVL3 470 aa23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 Tas1r1Q99PG6 842 aa23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 Klhl40Q9D783 621 aa23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 Slc15a2Q9ES07 729 aa23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 PfkpQ9WUA3 784 aaKnown RBP23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 Slc12a7Q9WVL3 1083 aa23.14■■□□□ 1.3
Ccdc88a-202ENSMUST00000109477 SrcapA0A087WQ44 3271 aa23.14■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Nfxl1E9Q8I7 918 aaKnown RBP23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Gm21973F6WEZ7 68 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Tnfrsf11aO35305 625 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Tnni3P48787 211 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 WasP70315 520 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Kcnd1Q03719 651 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Tlr13Q6R5N8 991 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Celf3Q8CIN6 465 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Tcp11l2Q8K1H7 517 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 AagabQ8R2R3 316 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 CbsQ91WT9 561 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cfap53Q9D439 514 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Sec14l1A8Y5H7 715 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Gimap9G3X987 291 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Rbp3P49194 1234 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 DmpkP54265 631 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 ZbbxQ0P5X5 716 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 DeptorQ570Y9 409 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Atp13a4Q5XF90 1193 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Znf131Q8K3J5 619 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Hspbp1Q99P31 357 aaKnown RBP23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 4931423N10RikQ9D4J9 382 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 FignQ9ERZ6 759 aa23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Myo5aQ99104 1853 aaKnown RBP23.13■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Apol6B7ZC55 329 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cyp2c37P56654 490 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Edem3Q2HXL6 931 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Mcf2lQ64096 1149 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Acot5Q6Q2Z6 421 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cyp2c54Q6XVG2 490 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Dclk3Q8BWQ5 790 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Map1sQ8C052 973 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Itgbl1Q8VDV0 494 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cyp2c50Q91X77 490 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Ccdc43Q9CR29 222 aaKnown RBP23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Kdm8Q9CXT6 414 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Tmem206Q9D771 350 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Msgn1Q9JK54 188 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Tlr5Q9JLF7 859 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Dnajc7Q9QYI3 494 aa23.12■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Ccdc191J3QQ27 883 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Nr1i3O35627 358 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 P01734 135 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Agxt2Q3UEG6 513 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Gzf1Q4VBD9 706 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Bag1Q60739 355 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Mkrn3Q60764 544 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Olfr395Q8VGR3 312 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Ppp1r3aQ99MR9 1089 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Klra10Q9R1G6 266 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Slfn14V9GXG1 899 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Smim10l2aA0A0B4J1F8 78 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 GclmO09172 274 aaKnown RBP23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Gjb1P28230 283 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Drp2Q05AA6 957 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Ppm1jQ149T7 507 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Tcerg1lQ3B807 590 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cd37Q61470 281 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Sh3d21Q7TSG5 549 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Mamdc2Q8CG85 686 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Klhl20Q8VCK5 604 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Xpo5Q924C1 1204 aaKnown RBP23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cep72Q9D3R3 646 aa23.11■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Prl6a1O35257 230 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 ByslO54825 436 aaKnown RBP23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 EpoP07321 192 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cct6aP80317 531 aaKnown RBP23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cyp3a11Q64459 504 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Nudt16Q6P3D0 195 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Ano5Q75UR0 904 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 6820408C15RikQ8BJX2 354 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Rassf10Q8BL43 508 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Prpf31Q8CCF0 499 aaKnown RBP23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Scyl2Q8CFE4 930 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Atp1a1Q8VDN2 1023 aaKnown RBP23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 GneQ91WG8 722 aaKnown RBP23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Slc12a9Q99MR3 914 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Spock2Q9ER58 423 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Cnga3Q9JJZ8 631 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Olig1Q9JKN5 260 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Fkbp1bQ9Z2I2 108 aa23.1■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 SktA2AQ25 1946 aaKnown RBP23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Mmp15O54732 657 aa23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Nptx2O70340 429 aa23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 GcP21614 476 aa23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 AdssP46664 456 aa23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 R3hdm4Q4VBF2 262 aa23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Samhd1Q60710 627 aa23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Ahcyl2Q68FL4 613 aaKnown RBP23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Nacc1Q7TSZ8 514 aa23.09■■□□□ 1.29
Ccdc88a-202ENSMUST00000109477 Ints8Q80V86 995 aa23.09■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms