RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 IvlP48997 467 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 AaasP58742 546 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Eepd1Q3TGW2 569 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cracr2aQ3UP38 310 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tbc1d1Q60949 1255 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pcsk7Q61139 770 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 WaplQ65Z40 1200 aaKnown RBP12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Depdc1bQ8BH88 529 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Snx14Q8BHY8 964 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ccdc113Q8C5T8 377 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Acat1Q8QZT1 424 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pdxdc1Q99K01 787 aaKnown RBP12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rasgef1cQ9D300 466 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Fthl17aQ9DAX0 182 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Phtf1Q9QZ09 761 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rbm6S4R1W5 1118 aaKnown RBP12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mmrn1B2RPV6 1210 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mpp3O88910 568 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 AfpP02772 605 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mybl2P48972 704 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Bend4P86174 541 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Trmt1Q3TX08 663 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ndufaf2Q59J78 168 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Brip1Q5SXJ3 1174 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ugt1a9Q62452 528 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Fbxo10Q7TQF2 950 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Nucks1Q80XU3 234 aaKnown RBP12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Btbd7Q8CFE5 1130 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Commd10Q8JZY2 202 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Champ1Q8K327 802 aaKnown RBP12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ccdc182Q9D9C6 152 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tlr2Q9QUN7 784 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cfap70D3YVL2 1141 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pon1P52430 355 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Lrrn4P59383 733 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Etv6P97360 485 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cul4aQ3TCH7 759 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Nlrp4cQ3TKR3 982 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Q3TTJ4 293 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tas2r134Q7TQB0 298 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Usp20Q8C6M1 916 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Vps52Q8C754 723 aaKnown RBP12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ppm1fQ8CGA0 452 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 CsadQ9DBE0 493 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cse1lQ9ERK4 971 aaKnown RBP12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Scgb2b20Q9JI02 112 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Flt1P35969 1333 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mtcl1Q3UHU5 1945 aa12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Arfgef1G3X9K3 1846 aaKnown RBP12.49□□□□□ -0.41
Col9a1-202ENSMUST00000088349 PtenO08586 403 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Idh1O88844 414 aaKnown RBP12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Xxylt1Q3U4G3 392 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rsad1Q5SUV1 442 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Elf1Q60775 612 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Grik5Q61626 979 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Adat2Q6P6J0 191 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Fbxo11Q7TPD1 930 aaKnown RBP12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 TbataQ7TSD4 393 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Sh3d21Q7TSG5 549 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 AsphQ8BSY0 741 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Elmo3Q8BYZ7 720 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Proser2Q8C5R2 471 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ccdc124Q9D8X2 217 aaKnown RBP12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mipol1Q9D9F8 279 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Chd5A2A8L1 1946 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ppp1r9aH3BJD6 1292 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Trim43cP86449 446 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 HnrnpdQ60668 355 aaKnown RBP12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Zbtb7bQ64321 544 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Trim37Q6PCX9 961 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tmc3Q7TQ69 1130 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ccdc15Q8C9M2 810 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 CactinQ9CS00 772 aaKnown RBP12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 IscuQ9D7P6 168 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Znf354bQ9QXT9 601 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tnfaip8l3Q3TBL6 204 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Scarf1Q5ND28 820 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Myh10Q61879 1976 aaKnown RBP12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Oca2Q62052 833 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Dlg4Q62108 724 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gga2Q6P5E6 603 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Nap1l4Q78ZA7 375 aaKnown RBP12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tmc4Q7TQ65 694 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rnaseh2bQ80ZV0 308 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Dcaf8Q8N7N5 591 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gpsm2Q8VDU0 679 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mageb16Q9CWV4 363 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rtn3Q9ES97 964 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rnf4Q9QZS2 194 aa12.48□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm3095E9Q058 166 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 EporP14753 507 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ddr1Q03146 911 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Dph1Q5NCQ5 438 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Serpinb1cQ5SV42 375 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rasa3Q60790 834 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ptger2Q62053 362 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Daam2Q80U19 1115 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Kat5Q8CHK4 513 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pkn3Q8K045 878 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cyp2s1Q9DBX6 501 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms