RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 GabpaQ00422 454 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nlrp4cQ3TKR3 982 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Mier3Q3UHF3 551 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Oog3Q3UWY1 500 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm11437Q5QR91 290 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tom1l2Q5SRX1 507 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tfe3Q64092 572 aaKnown RBP12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 GartQ64737 1010 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 ChpfQ6IQX7 774 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rassf6Q80UQ2 353 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Atg4cQ811C2 458 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Erlin2Q8BFZ9 340 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ppil2Q9D787 521 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 FignQ9ERZ6 759 aa12.3□□□□□ -0.44
Ddx55-201ENSMUST00000071057 NinQ61043 2035 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cacna1fQ9JIS7 1985 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Fam81bA0A140LI28 432 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm15262A0A140LIQ5 728 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Hnrnph3D3Z3N4 346 aaKnown RBP12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ap1b1O35643 943 aaKnown RBP12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Pgrmc1O55022 195 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gna14P30677 355 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cd68P31996 326 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 RcvrnP34057 202 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Pafah1b1P63005 410 aaKnown RBP12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tmtc1Q3UV71 942 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Klra7Q60654 280 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Irak1Q62406 710 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Hdac10Q6P3E7 666 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 TxlnaQ6PAM1 554 aaKnown RBP12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Krt9Q6RHW0 743 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Pcp4l1Q6W8Q3 68 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rnf168Q80XJ2 565 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gpr150Q8BL07 427 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Bri3bpQ8BXV2 253 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Epc1Q8C9X6 813 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Msantd4Q91YU3 345 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 PdhbQ9D051 359 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Atg7Q9D906 698 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 DonsonQ9QXP4 560 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Got1P05201 413 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tgfb2P27090 414 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Mmp20P57748 482 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Atp8b1Q148W0 1251 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Map3k11Q80XI6 850 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Znf618Q80YY7 953 aaKnown RBP12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Scyl2Q8CFE4 930 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cdk17Q8K0D0 523 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Sar1bQ9CQC9 198 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Erp44Q9D1Q6 406 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 PigoQ9JJI6 1093 aa12.29□□□□□ -0.44
Ddx55-201ENSMUST00000071057 AW822073A0A0N4SUK1 652 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ttll10A4Q9F3 704 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Zfp408H7BX78 710 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tnfrsf11aO35305 625 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Fgfr2P21803 821 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rps6P62754 249 aaKnown RBP12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Lmntd2Q0VET5 664 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 NntQ61941 1086 aaKnown RBP12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Wdr44Q6NVE8 915 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Mapk4Q6P5G0 583 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Trim17Q7TPM3 477 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Sgms1Q8VCQ6 419 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tpd52l2Q9CYZ2 220 aaKnown RBP12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Armc9Q9D2I5 817 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Trim10Q9WUH5 489 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Eif2ak3Q9Z2B5 1114 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tspoap1Q7TNF8 1846 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Myh11O08638 1972 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ace3D0G895 737 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Itgb5O70309 798 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Prkg1P0C605 671 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Mdh1P14152 334 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gad1P48318 593 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Fgfr4Q03142 799 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Atp13a4Q5XF90 1193 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 A1cfQ5YD48 595 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Krit1Q6S5J6 736 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Usp17leQ7M764 540 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 OtoaQ8K561 1137 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 AagabQ8R2R3 316 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 CbsQ91WT9 561 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 VillQ91YD6 859 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gps2Q921N8 327 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gsdmdc1Q9D8T2 487 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 AvenQ9D9K3 342 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Usp21Q9QZL6 566 aa12.28□□□□□ -0.44
Ddx55-201ENSMUST00000071057 XdhQ00519 1335 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm3409A0A0G2JE67 319 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm45194A0A140LJG2 572 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gm4758L7N258 96 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Sema4dO09126 861 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Gucy1b3O54865 620 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 MyocO70624 490 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ttll12Q3UDE2 639 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tmprss11eQ5S248 423 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Krt31Q61765 416 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ccpg1Q640L3 753 aa12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Dync1li2Q6PDL0 492 aaKnown RBP12.27□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rassf10Q8BL43 508 aa12.27□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms