RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Tmem63cQ8CBX0 802 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Kcnq3Q8K3F6 873 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 TarsQ9D0R2 722 aaKnown RBP13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Rnf6Q9DBU5 667 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Pold3Q9EQ28 462 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Grin1P35438 938 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Ppp1r37Q8BKR5 712 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 TwnkQ8CIW5 685 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Ero1aQ8R180 464 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 ChiaQ91XA9 473 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Vmn2r23E9PXI5 849 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Castor1Q9CWQ8 331 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 EtfbQ9DCW4 255 aaKnown RBP13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Ing2Q9ESK4 281 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Slc4a9E9PUP3 929 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Pbxip1Q3TVI8 727 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 ItgaeQ60677 1167 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Rbbp7Q60973 425 aaKnown RBP13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Hif1aQ61221 836 aaKnown RBP13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Cyp4x1Q6A152 507 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 ScocQ78YZ6 125 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 MbipQ99LQ1 341 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Fem1bQ9Z2G0 627 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Psmc1P62192 440 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Khdrbs1Q60749 443 aaKnown RBP13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Vmn1r214Q8R279 367 aa13.4□□□□□ -0.26
Ccdc88c-201ENSMUST00000068411 Prl3b1P09586 222 aa13.4□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 RnaselQ05921 735 aa13.4□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Sv2cQ69ZS6 727 aa13.4□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ppp2r2aQ6P1F6 447 aa13.4□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Mknk2Q8CDB0 459 aa13.4□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 NfkbiaQ9Z1E3 314 aa13.4□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Psmd10Q9Z2X2 231 aa13.4□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm9774A0A0A6YVU8 407 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ttc30a2A2AKQ8 664 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Exoc4O35382 975 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Grem2O88273 168 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Cdh15P33146 784 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Rsad1Q5SUV1 442 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Rasa3Q60790 834 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Igsf1Q7TQA1 1317 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ttc30a1Q99J38 664 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ttc30bQ9CY00 664 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Acad12D3Z7X0 555 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Apol11bE9PUZ0 337 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Stam2O88811 523 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Pou6f1Q07916 301 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Lmntd2Q0VET5 664 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 CrkQ64010 304 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Akt1s1Q9D1F4 257 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Krtap5-3Q9D226 196 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 A530032D15RikE9Q422 215 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Mark3Q03141 753 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Dhx40Q6PE54 779 aaKnown RBP13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Trim65Q8BFW4 522 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Dpp9Q8BVG4 862 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Myoz2Q9JJW5 264 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Shcbp1Q9Z179 668 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Pfkfb3A7UAK5 555 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 RenbpP82343 430 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm1604bQ3TRG0 118 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ccna1Q61456 421 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Fam180aQ8BR21 173 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Sik2Q8CFH6 931 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nmrk1Q91W63 195 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Bzw1Q9CQC6 419 aaKnown RBP13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Irf5P56477 497 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ddx3yQ62095 658 aaKnown RBP13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 MarsQ68FL6 902 aaKnown RBP13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 LRWD1Q8BUI3 648 aaKnown RBP13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Cep95Q8BVV7 827 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Amhr2Q8K592 568 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Kdm5aQ3UXZ9 1690 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm5795E9PZN8 263 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Fbxo18Q8K2I9 1042 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Champ1Q8K327 802 aaKnown RBP13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Slc8a3S4R2P9 928 aa13.39□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Pid1Q3UBG2 217 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Bbs7Q8K2G4 715 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Tlr3Q99MB1 905 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Pgm1Q9D0F9 562 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Scg2Q03517 617 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Armcx2Q6A058 784 aaKnown RBP13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Dennd2cQ6P9P8 914 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Strip2Q8C9H6 844 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Pspc1Q8R326 523 aaKnown RBP13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Olfr397Q8VEZ6 315 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 FtcdQ91XD4 541 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ubxn11Q9D572 484 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Anapc7Q9WVM3 565 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 CraddO88843 199 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Krt40Q6IFX3 439 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Hdac10Q6P3E7 666 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 TbckQ8BM85 762 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Cyp2c50Q91X77 490 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ubxn8Q9QZ49 277 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Znf335A2A5K6 1337 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Zfp788E9Q980 884 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 C130060K24RikG3UWA8 416 aa13.38□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ifnb1P01575 182 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms