RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Usp17lbE9Q9U0 468 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 FancbQ5XJY6 703 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mindy1Q76LS9 468 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Trim65Q8BFW4 522 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slc4a7Q8BTY2 1034 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Spice1Q8C804 860 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Nemp2Q8CB65 421 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Arhgap29Q8CGF1 1266 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rassf9Q8K342 435 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 PlvapQ91VC4 438 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Pls3Q99K51 630 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 MycbpQ9EQS3 103 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ror2Q9Z138 944 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Nmt1O70310 496 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rhbdl3P58873 404 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ect2Q07139 913 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Trim71Q1PSW8 855 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rasip1Q3U0S6 961 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ap5z1Q3U829 807 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Armcx2Q6A058 784 aaKnown RBP11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Atg16l1Q8C0J2 607 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 N4bp3Q8C7U1 537 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tmem132cQ8CEF9 1099 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ulbp1Q8HWA3 334 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Q922C1 641 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 RpainQ9CWY9 219 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 ParvaQ9EPC1 372 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 FignQ9ERZ6 759 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Igsf9bE9PZ19 1328 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 CluhQ5SW19 1315 aa11.01□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Col14a1Q80X19 1797 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Abcb5B5X0E4 1255 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Il2P04351 169 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ifnar1P33896 590 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ttc39dQ0VF76 604 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Prmt9Q3U3W5 846 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ppp1r12cQ3UMT1 782 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Fam92bQ3V2J0 292 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tmem232Q5K6N0 675 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Fam114a2Q8VE88 497 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Plagl2Q925T4 496 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ccdc182Q9D9C6 152 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 1700013H16RikQ9DAC5 291 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tnni1Q9WUZ5 187 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mtmr1Q9Z2C4 669 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Supt3B0QZW4 406 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ccdc24E9PUW8 296 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Xbp1O35426 267 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ift81O35594 676 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 C1qbpO35658 278 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Hspa1lP16627 641 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Map3k7clP58500 142 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Agap2Q3UHD9 1186 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Sin3bQ62141 1098 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Kcnk18Q6VV64 394 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Actn1Q7TPR4 892 aaKnown RBP11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rcn2Q8BP92 320 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Bpifb6Q8BU51 449 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Pnma1Q8C1C8 353 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ints9Q8K114 658 aaKnown RBP11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 BrdtQ91Y44 956 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Castor1Q9CWQ8 331 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Etnk1Q9D4V0 363 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Bnip3lQ9Z2F7 218 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slc35g2D3YVE8 412 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gucy2eP52785 1108 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Asprv1Q09PK2 339 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Llgl2Q3TJ91 1027 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ipo5Q8BKC5 1097 aaKnown RBP11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Chn1Q91V57 459 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gimap4Q99JY3 219 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Hspbp1Q99P31 357 aaKnown RBP11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Naaladl2A0A0N4SUJ3 795 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Cul4bA2A432 970 aaKnown RBP11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Zfand4D3Z3C6 739 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 DffaO54786 331 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Lrrc4bP0C192 709 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Cst8P32766 142 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Fen1P39749 378 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Fam193bQ3U2K0 892 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mettl17Q3U2U7 461 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Oog4Q4G0C7 502 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tlr11Q6R5P0 926 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Atxn2lQ7TQH0 1049 aaKnown RBP11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slc7a14Q8BXR1 771 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tbc1d10cQ8C9V1 444 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 CerkQ8K4Q7 531 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Psmd6Q99JI4 389 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Syap1Q9D5V6 365 aa11□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 MagohP61327 146 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 NfixP70257 488 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Kcnd1Q03719 651 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Zbtb16Q3UQ17 673 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Fra10ac1Q8BP78 315 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 MagohbQ9CQL1 146 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slc13a1Q9JHI4 594 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slc40a1Q9JHI9 570 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Myo1cQ9WTI7 1063 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Kif13aQ9EQW7 1749 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Nrxn3Q6P9K9 1571 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 161.5 ms