RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Cdc25aP48964 514 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Pdp2Q504M2 532 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Ndc80Q9D0F1 642 aaKnown RBP24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Tmem206Q9D771 350 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Dkc1Q9ESX5 509 aaKnown RBP24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 L3mbtl1A2A5N8 826 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Lrrc63A6H694 637 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Akr1b10G5E895 316 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Hnrnph1O35737 449 aaKnown RBP24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Atp11aP98197 1187 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 ScinQ60604 715 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Foxd4Q60688 444 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 4933409G03RikQ8C5U0 320 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Vwa5aQ99KC8 793 aaKnown RBP24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Zfp804bA0A0G2JGH6 1343 aa24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Cep152A2AUM9 1736 aaKnown RBP24.59■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Gm2237E9Q501 211 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Rap1gds1E9Q912 607 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Gm3591K7N6X2 186 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Ino80bQ99PT3 375 aaKnown RBP24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Styxl1Q9DAR2 321 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 ParvaQ9EPC1 372 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Pus3Q9JI38 481 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Itga2bQ9QUM0 1033 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Chek2Q9Z265 546 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Mtmr10Q7TPM9 771 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Dnajc6Q80TZ3 938 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Fads3Q9JJE7 449 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Krt35Q497I4 455 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Atl2Q6PA06 583 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Ubxn10Q8BG34 277 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Slc12a8Q8VI23 705 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Krt17Q9QWL7 433 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Tk2Q9R088 270 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Gm5795E9PZN8 263 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Gm5592Q3V0A6 857 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Svs3bQ8BZH8 265 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Snx2Q9CWK8 519 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Tnni1Q9WUZ5 187 aa24.58■■□□□ 1.53
Sh3rf1-201ENSMUST00000034060 Gm36028A0A0U1RPM1 299 aa24.58■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Dab1P97318 588 aa24.58■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Rgl1Q60695 768 aa24.58■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 RubcnQ80U62 956 aa24.58■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Kiaa0391Q8JZY4 584 aaKnown RBP24.58■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 TarsQ9D0R2 722 aaKnown RBP24.58■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Cylc2B1AWN8 422 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Gm3402K7N5P2 326 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Gm7942L7N277 499 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 CatspereP0DP43 985 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Mark3Q03141 753 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 InscQ3HNM7 579 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 HltfQ6PCN7 1003 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Rmnd1Q8CI78 450 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Coa7Q921H9 231 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Ubxn8Q9QZ49 277 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Gm6370A0A0G2JGX9 315 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Gm6309L7N481 315 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Cse1lQ9ERK4 971 aaKnown RBP24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Atp1b3P97370 278 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 PighQ5M9N4 188 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Baiap3Q80TT2 1134 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Pik3r1P26450 724 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Llgl2Q3TJ91 1027 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 CtsqQ91ZF4 343 aa24.57■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Map7d3A2AEY4 876 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 RaraP11416 462 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Psmc1P62192 440 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Acot6Q32Q92 419 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 ThrspQ62264 150 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Usp54Q8BL06 1588 aaKnown RBP24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Abcb5B5X0E4 1255 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Pdcd2P46718 343 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Kcnn2P58390 839 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Tmprss11aQ3UQ41 389 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Sco1Q5SUC9 284 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Tcp10aQ80W76 438 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Best2Q8BGM5 508 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 BaatQ91X34 420 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Nek3Q9R0A5 511 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 FscbA1EGX6 1074 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Rabgap1lA6H6A9 815 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Gm17615E9Q9P2 165 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 MybP06876 636 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Inpp1P49442 396 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Spire2Q8K1S6 718 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Bbs7Q8K2G4 715 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Cdk8Q8R3L8 464 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Rpa1Q8VEE4 623 aaKnown RBP24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 PccaQ91ZA3 724 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Trp53inp1Q9QXE4 239 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Akt3Q9WUA6 479 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Vmn2r23E9PXI5 849 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Setd4P58467 439 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Aipl1Q924K1 328 aa24.56■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Trappc11B2RXC1 1133 aa24.55■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Pdzrn4E9PUZ9 1014 aa24.55■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Tex11Q14AT2 947 aa24.55■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Edem3Q2HXL6 931 aa24.55■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Chn2Q80XD1 332 aa24.55■■□□□ 1.52
Sh3rf1-201ENSMUST00000034060 Ppp4r4Q8C0Y0 875 aa24.55■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms