RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Phrf1A6H619 1682 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 PurbO35295 324 aaKnown RBP9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tal1P22091 329 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Snx25Q3ZT31 840 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tor4aQ8BH02 426 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Thumpd2Q9CZB3 528 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 1700016D06RikQ9DAA5 166 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 AfdnQ9QZQ1 1820 aaKnown RBP9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm3127E9Q9P5 263 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm3453K7N724 263 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fam107bQ3TGF2 131 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Zfp953Q3UPV7 304 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Btnl9Q8BJE2 536 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Znrd1-asQ8R0E5 213 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Usp33Q8R5K2 909 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 3830403N18RikQ9D6C3 208 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Klrc1Q9Z202 244 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Btbd18A0A0A6YY25 723 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Osbpl9A2A8Z1 736 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 DgkiD3YWQ0 1071 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rgs22G3UYX5 1258 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sec24cG3X972 1096 aaKnown RBP9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 MyocO70624 490 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ap1m1P35585 423 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 FancbQ5XJY6 703 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 AmphQ7TQF7 686 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 E330017A01RikQ8BU47 192 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ddx39aQ8VDW0 427 aaKnown RBP9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Chn1Q91V57 459 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Med10Q9CXU0 135 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 FibpQ9JI19 357 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Shank3Q4ACU6 1730 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Magea4F2Z493 315 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Chrna9G3X8Z7 479 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sept7O55131 436 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rps6P62754 249 aaKnown RBP9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gbp1Q01514 589 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 CbarpQ66L44 698 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cplx4Q80WM3 160 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ireb2Q811J3 963 aaKnown RBP9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Trim65Q8BFW4 522 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Polr2bQ8CFI7 1174 aaKnown RBP9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Onecut3Q8K557 490 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Mcur1Q9CXD6 340 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 JcadQ5DTX6 1320 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ppfia4B8QI36 1187 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Prkg1P0C605 671 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Dync1li2Q6PDL0 492 aaKnown RBP9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fbxo28Q8BIG4 368 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 EtnpplQ8BWU8 499 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Mrgprx1Q8CIP3 322 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 JmyQ9QXM1 983 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rnaseh1O70338 285 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ppp1r7Q3UM45 361 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Lgr6Q3UVD5 967 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Trim47Q8C0E3 641 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rtp1Q8C8C1 263 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Polr3fQ921X6 316 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Capn12Q9ER56 720 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Chmp6P0C0A3 200 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 PltpP55065 493 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Kdm7aQ3UWM4 940 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm11437Q5QR91 290 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Vat1lQ80TB8 417 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ankfy1Q810B6 1169 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gtpbp10Q8K013 366 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Vmn1r218Q8R261 298 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 DaglbQ91WC9 669 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Uchl3Q9JKB1 230 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Hyou1Q9JKR6 999 aaKnown RBP9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Atp2a2O55143 1044 aaKnown RBP9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Pak4Q8BTW9 593 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Zmynd15Q8C0R7 736 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Apol9bQ8C7I4 310 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Klhl36Q8R124 613 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Slc26a7Q8R2Z3 656 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Apol9aQ8VDU3 310 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gdap1l1Q8VE33 370 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Osbpl1aQ91XL9 950 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Xpo5Q924C1 1204 aaKnown RBP9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Xab2Q9DCD2 855 aaKnown RBP9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tlr5Q9JLF7 859 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tjp2Q9Z0U1 1167 aaKnown RBP9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Calhm6Q8C9E8 313 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tmem39aQ9CYC3 486 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Adam22Q9R1V6 904 aa9.12□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Olfr552E9Q545 317 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Dzip1lQ499E4 774 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Olfml3Q8BK62 406 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Scrn2Q8VCA8 425 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Abcb11Q9QY30 1321 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fer1l6E0CZ42 1862 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 CopeO89079 308 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Csf1rP09581 977 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 CactinQ9CS00 772 aaKnown RBP9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rpap3Q9D706 660 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rnf103Q9R1W3 683 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Col2a1P28481 1487 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm4985A2ALC6 410 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Zfp266E9Q2S7 604 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms