RNA–Protein interactions for RNA: YPL119C

DBP1, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP1, Length 1,854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP1	YPL119C	TRP5	P00931	707 aa	Known RBP	11.75	□□□□□ -0.53
DBP1	YPL119C	CTF4	Q01454	927 aa		11.74	□□□□□ -0.53
DBP1	YPL119C	COQ4	O13525	335 aa		11.74	□□□□□ -0.53
DBP1	YPL119C	ENT1	Q12518	454 aa		11.72	□□□□□ -0.53
DBP1	YPL119C	REB1	P21538	810 aa		11.71	□□□□□ -0.53
DBP1	YPL119C	NSE3	Q05541	303 aa		11.71	□□□□□ -0.53
DBP1	YPL119C	EDE1	P34216	1381 aa		11.71	□□□□□ -0.53
DBP1	YPL119C	KCC4	P25389	1037 aa		11.7	□□□□□ -0.54
DBP1	YPL119C	CSI1	Q04368	295 aa		11.7	□□□□□ -0.54
DBP1	YPL119C	RSF2	P46974	1380 aa		11.69	□□□□□ -0.54
DBP1	YPL119C	UGA3	P26370	528 aa		11.69	□□□□□ -0.54
DBP1	YPL119C	INP54	Q08227	384 aa	Known RBP	11.68	□□□□□ -0.54
DBP1	YPL119C	NUP145	P49687	1317 aa		11.68	□□□□□ -0.54
DBP1	YPL119C	ILV3	P39522	585 aa	Known RBP	11.68	□□□□□ -0.54
DBP1	YPL119C	YPP1	P46951	817 aa		11.68	□□□□□ -0.54
DBP1	YPL119C	YNG2	P38806	282 aa	Known RBP	11.67	□□□□□ -0.54
DBP1	YPL119C	YFR016C	P43597	1233 aa	Known RBP	11.66	□□□□□ -0.54
DBP1	YPL119C	YGR122W	P53272	402 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	APP1	P53933	587 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	YRF1-3	P0CX14	1859 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	YRF1-7	P0CX15	1859 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	YRF1-6	P53819	1859 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	RAD4	P14736	754 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	YFR006W	P43590	535 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	SPO1	P53541	631 aa		11.66	□□□□□ -0.54
DBP1	YPL119C	IES2	P40154	320 aa		11.65	□□□□□ -0.54
DBP1	YPL119C	NOP8	Q08287	484 aa	Predicted RBP	11.65	□□□□□ -0.54
DBP1	YPL119C	ALE1	Q08548	619 aa		11.65	□□□□□ -0.54
DBP1	YPL119C	ENV9	Q08651	330 aa		11.65	□□□□□ -0.54
DBP1	YPL119C	ADE16	P54113	591 aa	Known RBP	11.64	□□□□□ -0.55
DBP1	YPL119C	YOL057W	Q08225	711 aa		11.63	□□□□□ -0.55
DBP1	YPL119C	RAD24	P32641	659 aa		11.62	□□□□□ -0.55
DBP1	YPL119C	OPY1	P38271	328 aa		11.62	□□□□□ -0.55
DBP1	YPL119C	ZDS2	P54786	942 aa		11.62	□□□□□ -0.55
DBP1	YPL119C	MEC3	Q02574	474 aa		11.62	□□□□□ -0.55
DBP1	YPL119C	RPS19A	P07280	144 aa	Known RBP	11.61	□□□□□ -0.55
DBP1	YPL119C	RPS19B	P07281	144 aa	Predicted RBP	11.61	□□□□□ -0.55
DBP1	YPL119C	OSM1	P21375	501 aa	Known RBP	11.61	□□□□□ -0.55
DBP1	YPL119C	YKL133C	P36066	463 aa		11.61	□□□□□ -0.55
DBP1	YPL119C	FRK1	Q03002	865 aa	Predicted RBP	11.61	□□□□□ -0.55
DBP1	YPL119C	MRP7	P12687	371 aa		11.6	□□□□□ -0.55
DBP1	YPL119C	SWC3	P31376	625 aa		11.6	□□□□□ -0.55
DBP1	YPL119C	NMD2	P38798	1089 aa	Known RBP	11.59	□□□□□ -0.55
DBP1	YPL119C	ATG13	Q06628	738 aa		11.59	□□□□□ -0.55
DBP1	YPL119C	LYS2	P07702	1392 aa		11.59	□□□□□ -0.55
DBP1	YPL119C	IME2	P32581	645 aa		11.58	□□□□□ -0.56
DBP1	YPL119C	RFC1	P38630	861 aa	Known RBP	11.58	□□□□□ -0.56
DBP1	YPL119C	YIR014W	P40570	242 aa		11.57	□□□□□ -0.56
DBP1	YPL119C	NKP2	Q06162	153 aa		11.57	□□□□□ -0.56
DBP1	YPL119C	YBP2	P53169	641 aa		11.56	□□□□□ -0.56
DBP1	YPL119C	ECM16	Q04217	1267 aa	Known RBP	11.56	□□□□□ -0.56
DBP1	YPL119C	YDR306C	Q06640	478 aa		11.55	□□□□□ -0.56
DBP1	YPL119C	NUP133	P36161	1157 aa		11.55	□□□□□ -0.56
DBP1	YPL119C	IMH1	Q06704	911 aa	Known RBP	11.55	□□□□□ -0.56
DBP1	YPL119C	YAH1	Q12184	172 aa	Known RBP	11.55	□□□□□ -0.56
DBP1	YPL119C	VPS64	Q03944	604 aa		11.54	□□□□□ -0.56
DBP1	YPL119C	BOI2	P39969	1040 aa		11.53	□□□□□ -0.56
DBP1	YPL119C	DNM1	P54861	757 aa		11.53	□□□□□ -0.56
DBP1	YPL119C	RMT2	Q03305	412 aa		11.53	□□□□□ -0.56
DBP1	YPL119C	CST6	P40535	587 aa		11.51	□□□□□ -0.57
DBP1	YPL119C	RAD50	P12753	1312 aa		11.5	□□□□□ -0.57
DBP1	YPL119C	BDP1	P46678	594 aa		11.5	□□□□□ -0.57
DBP1	YPL119C	COB	P00163	385 aa		11.49	□□□□□ -0.57
DBP1	YPL119C	GCD7	P32502	381 aa	Predicted RBP	11.49	□□□□□ -0.57
DBP1	YPL119C	EAF7	P53911	425 aa	Known RBP	11.49	□□□□□ -0.57
DBP1	YPL119C	TUM1	Q08686	304 aa	Known RBP	11.49	□□□□□ -0.57
DBP1	YPL119C	SWI1	P09547	1314 aa		11.49	□□□□□ -0.57
DBP1	YPL119C	PCT1	P13259	424 aa		11.49	□□□□□ -0.57
DBP1	YPL119C	APL2	P36000	726 aa	Predicted RBP	11.49	□□□□□ -0.57
DBP1	YPL119C	NOP53	Q12080	455 aa	Known RBP	11.49	□□□□□ -0.57
DBP1	YPL119C	RLF2	Q12495	606 aa		11.48	□□□□□ -0.57
DBP1	YPL119C	ROM2	P51862	1356 aa	Known RBP	11.48	□□□□□ -0.57
DBP1	YPL119C	DOT5	P40553	215 aa		11.47	□□□□□ -0.57
DBP1	YPL119C	RIM15	P43565	1770 aa		11.46	□□□□□ -0.58
DBP1	YPL119C	LPD1	P09624	499 aa	Known RBP	11.46	□□□□□ -0.58
DBP1	YPL119C	FOX2	Q02207	900 aa	Known RBP	11.46	□□□□□ -0.58
DBP1	YPL119C	DLD1	P32891	587 aa		11.45	□□□□□ -0.58
DBP1	YPL119C	BRN1	P38170	754 aa		11.45	□□□□□ -0.58
DBP1	YPL119C	UBP12	P39538	1254 aa		11.44	□□□□□ -0.58
DBP1	YPL119C	SSP2	Q08646	371 aa		11.44	□□□□□ -0.58
DBP1	YPL119C	GCR2	Q01722	534 aa		11.44	□□□□□ -0.58
DBP1	YPL119C	CDC16	P09798	840 aa		11.43	□□□□□ -0.58
DBP1	YPL119C	HGH1	P48362	394 aa	Known RBP	11.43	□□□□□ -0.58
DBP1	YPL119C	VAS1	P07806	1104 aa	Known RBP	11.42	□□□□□ -0.58
DBP1	YPL119C	YJR008W	P47085	338 aa		11.42	□□□□□ -0.58
DBP1	YPL119C	PKH1	Q03407	766 aa		11.42	□□□□□ -0.58
DBP1	YPL119C	YPR204W	Q08995	1032 aa		11.42	□□□□□ -0.58
DBP1	YPL119C	RMD1	Q03441	430 aa		11.42	□□□□□ -0.58
DBP1	YPL119C	DJP1	P40564	432 aa		11.41	□□□□□ -0.58
DBP1	YPL119C	NCB2	Q92317	146 aa		11.41	□□□□□ -0.58
DBP1	YPL119C	GRX1	P25373	110 aa	Known RBP	11.4	□□□□□ -0.58
DBP1	YPL119C	YKR075C	P36155	307 aa		11.4	□□□□□ -0.58
DBP1	YPL119C	HXT13	P39924	564 aa		11.4	□□□□□ -0.59
DBP1	YPL119C	ARG8	P18544	423 aa		11.39	□□□□□ -0.59
DBP1	YPL119C	HXT10	P43581	546 aa		11.39	□□□□□ -0.59
DBP1	YPL119C	YGL082W	P53155	381 aa		11.39	□□□□□ -0.59
DBP1	YPL119C	HXT17	P53631	564 aa		11.39	□□□□□ -0.59
DBP1	YPL119C	FCP1	Q03254	732 aa		11.39	□□□□□ -0.59
DBP1	YPL119C	LAM6	Q08001	693 aa		11.38	□□□□□ -0.59
DBP1	YPL119C	SLA1	P32790	1244 aa		11.38	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms