RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W SLY41P22215 453 aa4.25□□□□□ -1.73
SMD1YGR074W IES2P40154 320 aa4.25□□□□□ -1.73
SMD1YGR074W NIS1P53939 407 aa4.25□□□□□ -1.73
SMD1YGR074W YMR196WQ04336 1088 aa4.25□□□□□ -1.73
SMD1YGR074W ARG82P07250 355 aa4.24□□□□□ -1.73
SMD1YGR074W DSF2P38213 736 aa4.24□□□□□ -1.73
SMD1YGR074W LEO1P38439 464 aa4.24□□□□□ -1.73
SMD1YGR074W YFL066CP43538 392 aa4.24□□□□□ -1.73
SMD1YGR074W TBF1Q02457 562 aa4.24□□□□□ -1.73
SMD1YGR074W ALR1Q08269 859 aa4.24□□□□□ -1.73
SMD1YGR074W IXR1P33417 597 aa4.23□□□□□ -1.73
SMD1YGR074W OSH7P38755 437 aa4.23□□□□□ -1.73
SMD1YGR074W PUS6P53294 404 aa4.23□□□□□ -1.73
SMD1YGR074W AAD14P42884 376 aa4.22□□□□□ -1.73
SMD1YGR074W RPA14P50106 137 aa4.22□□□□□ -1.73
SMD1YGR074W SPB4P25808 606 aaPredicted RBP4.21□□□□□ -1.74
SMD1YGR074W YJR098CP47139 656 aa4.21□□□□□ -1.74
SMD1YGR074W NUP42P49686 430 aaKnown RBP4.21□□□□□ -1.74
SMD1YGR074W FPK1P53739 893 aa4.21□□□□□ -1.74
SMD1YGR074W YPR097WQ06839 1073 aa4.21□□□□□ -1.74
SMD1YGR074W TCB1Q12466 1186 aa4.21□□□□□ -1.74
SMD1YGR074W YDL206WQ12424 762 aa4.2□□□□□ -1.74
SMD1YGR074W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
SMD1YGR074W TAF7Q05021 590 aa4.19□□□□□ -1.74
SMD1YGR074W SAS10Q12136 610 aaPredicted RBP4.19□□□□□ -1.74
SMD1YGR074W SKN7P38889 622 aa4.18□□□□□ -1.74
SMD1YGR074W DIT2P21595 489 aa4.17□□□□□ -1.74
SMD1YGR074W LEU3P08638 886 aa4.15□□□□□ -1.75
SMD1YGR074W TRM1P15565 570 aaKnown RBP4.15□□□□□ -1.75
SMD1YGR074W DLD1P32891 587 aa4.15□□□□□ -1.75
SMD1YGR074W HST2P53686 357 aa4.15□□□□□ -1.75
SMD1YGR074W MMP1Q12372 583 aa4.15□□□□□ -1.75
SMD1YGR074W SCJ1P25303 377 aa4.14□□□□□ -1.75
SMD1YGR074W GLN1P32288 370 aaKnown RBP4.13□□□□□ -1.75
SMD1YGR074W ATF2P53296 535 aa4.13□□□□□ -1.75
SMD1YGR074W YMR187CQ03236 431 aa4.13□□□□□ -1.75
SMD1YGR074W IRC24P40580 263 aa4.12□□□□□ -1.75
SMD1YGR074W VAC17P25591 423 aa4.11□□□□□ -1.75
SMD1YGR074W YBL086CP38177 466 aa4.1□□□□□ -1.75
SMD1YGR074W TDA6Q06466 467 aa4.1□□□□□ -1.75
SMD1YGR074W ADE12P80210 433 aaKnown RBP4.09□□□□□ -1.75
SMD1YGR074W ESS1P22696 170 aa4.08□□□□□ -1.76
SMD1YGR074W MAC1P35192 417 aa4.08□□□□□ -1.76
SMD1YGR074W RPN1P38764 993 aaKnown RBP4.08□□□□□ -1.76
SMD1YGR074W CEM1P39525 442 aa4.07□□□□□ -1.76
SMD1YGR074W APP1P53933 587 aa4.07□□□□□ -1.76
SMD1YGR074W NAM8Q00539 523 aaKnown RBP4.07□□□□□ -1.76
SMD1YGR074W CDC19P00549 500 aaKnown RBP4.06□□□□□ -1.76
SMD1YGR074W EMW1P42842 904 aaKnown RBP4.06□□□□□ -1.76
SMD1YGR074W CUZ1P53899 274 aa4.05□□□□□ -1.76
SMD1YGR074W YJU3P28321 313 aa4.04□□□□□ -1.76
SMD1YGR074W SBE2P42223 864 aaKnown RBP4.04□□□□□ -1.76
SMD1YGR074W ARG8P18544 423 aa4.03□□□□□ -1.76
SMD1YGR074W MKS1P34072 584 aa4.03□□□□□ -1.76
SMD1YGR074W MCX1P38323 520 aaPredicted RBP4.03□□□□□ -1.76
SMD1YGR074W RSC30P38781 883 aa4.03□□□□□ -1.76
SMD1YGR074W YPL034WQ03083 165 aa4.03□□□□□ -1.76
SMD1YGR074W BDS1Q08347 646 aa4.03□□□□□ -1.76
SMD1YGR074W PKH3Q03306 898 aaPredicted RBP4.02□□□□□ -1.77
SMD1YGR074W ITT1Q04638 464 aa4.02□□□□□ -1.77
SMD1YGR074W GLT1Q12680 2145 aaKnown RBP4.01□□□□□ -1.77
SMD1YGR074W AMN1P38285 549 aaPredicted RBP4.01□□□□□ -1.77
SMD1YGR074W DFG5Q05031 458 aa4.01□□□□□ -1.77
SMD1YGR074W VTC4P47075 721 aa4□□□□□ -1.77
SMD1YGR074W YNR021WP53723 404 aaKnown RBP4□□□□□ -1.77
SMD1YGR074W FIG4P42837 879 aa3.99□□□□□ -1.77
SMD1YGR074W YNR014WP53719 212 aa3.99□□□□□ -1.77
SMD1YGR074W YCK2P23292 546 aaKnown RBP3.98□□□□□ -1.77
SMD1YGR074W GLC3P32775 704 aa3.98□□□□□ -1.77
SMD1YGR074W RPP2BP02400 110 aaKnown RBP3.97□□□□□ -1.77
SMD1YGR074W TEC1P18412 486 aa3.97□□□□□ -1.77
SMD1YGR074W FBP26P32604 452 aa3.97□□□□□ -1.77
SMD1YGR074W CSN12P47130 423 aa3.97□□□□□ -1.77
SMD1YGR074W SYT1Q06836 1226 aa3.97□□□□□ -1.77
SMD1YGR074W YDR215CQ12240 137 aa3.97□□□□□ -1.77
SMD1YGR074W STE6P12866 1290 aa3.96□□□□□ -1.78
SMD1YGR074W LSB6P42951 607 aa3.96□□□□□ -1.78
SMD1YGR074W HGH1P48362 394 aaKnown RBP3.95□□□□□ -1.78
SMD1YGR074W KTR1P27810 393 aaKnown RBP3.94□□□□□ -1.78
SMD1YGR074W DAL1P32375 460 aa3.94□□□□□ -1.78
SMD1YGR074W DLD3P39976 496 aaKnown RBP3.94□□□□□ -1.78
SMD1YGR074W AIM7Q12156 149 aa3.94□□□□□ -1.78
SMD1YGR074W DIT1P21623 536 aa3.93□□□□□ -1.78
SMD1YGR074W GUT2P32191 649 aa3.93□□□□□ -1.78
SMD1YGR074W DMA2P53924 522 aa3.93□□□□□ -1.78
SMD1YGR074W ISU1Q03020 165 aa3.93□□□□□ -1.78
SMD1YGR074W RAD59Q12223 238 aa3.93□□□□□ -1.78
SMD1YGR074W YDR461C-AQ2V2P7 80 aa3.93□□□□□ -1.78
SMD1YGR074W YMR265CQ03508 461 aaKnown RBP3.92□□□□□ -1.78
SMD1YGR074W ATG20Q07528 640 aa3.92□□□□□ -1.78
SMD1YGR074W MCA1Q08601 432 aa3.92□□□□□ -1.78
SMD1YGR074W BOI2P39969 1040 aa3.91□□□□□ -1.78
SMD1YGR074W KIN1P13185 1064 aa3.9□□□□□ -1.79
SMD1YGR074W TAT1P38085 619 aa3.9□□□□□ -1.79
SMD1YGR074W SLN1P39928 1220 aaPredicted RBP3.9□□□□□ -1.79
SMD1YGR074W STE20Q03497 939 aaKnown RBP3.9□□□□□ -1.79
SMD1YGR074W UBP15P50101 1230 aa3.89□□□□□ -1.79
SMD1YGR074W KRE33P53914 1056 aaKnown RBP3.89□□□□□ -1.79
SMD1YGR074W YPR084WQ06821 456 aa3.89□□□□□ -1.79
SMD1YGR074W SSA2P10592 639 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms