RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C OSH7P38755 437 aa2.61□□□□□ -1.99
SEC1YDR164C YPR097WQ06839 1073 aa2.61□□□□□ -1.99
SEC1YDR164C LYS5P50113 272 aa2.61□□□□□ -1.99
SEC1YDR164C PUS6P53294 404 aa2.61□□□□□ -1.99
SEC1YDR164C CCP1P00431 361 aa2.6□□□□□ -1.99
SEC1YDR164C YMR196WQ04336 1088 aa2.6□□□□□ -1.99
SEC1YDR164C THI72Q08579 599 aa2.6□□□□□ -1.99
SEC1YDR164C MAM3Q12296 706 aa2.6□□□□□ -1.99
SEC1YDR164C YBL086CP38177 466 aa2.59□□□□□ -1.99
SEC1YDR164C FPK1P53739 893 aa2.59□□□□□ -1.99
SEC1YDR164C SBP1P10080 294 aaKnown RBP2.59□□□□□ -2
SEC1YDR164C CCT8P47079 568 aaKnown RBP2.59□□□□□ -2
SEC1YDR164C JJJ3P47138 172 aa2.59□□□□□ -2
SEC1YDR164C APP1P53933 587 aa2.59□□□□□ -2
SEC1YDR164C TRM1P15565 570 aaKnown RBP2.58□□□□□ -2
SEC1YDR164C IES2P40154 320 aa2.58□□□□□ -2
SEC1YDR164C ITT1Q04638 464 aa2.58□□□□□ -2
SEC1YDR164C AI1P03875 834 aa2.57□□□□□ -2
SEC1YDR164C SCJ1P25303 377 aa2.57□□□□□ -2
SEC1YDR164C CKB1P43639 278 aa2.56□□□□□ -2
SEC1YDR164C VAC17P25591 423 aa2.56□□□□□ -2
SEC1YDR164C YFL066CP43538 392 aa2.56□□□□□ -2
SEC1YDR164C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SEC1YDR164C NAM8Q00539 523 aaKnown RBP2.55□□□□□ -2
SEC1YDR164C YPR053CQ6Q5F3 151 aa2.55□□□□□ -2
SEC1YDR164C DFG5Q05031 458 aa2.54□□□□□ -2
SEC1YDR164C CDC19P00549 500 aaKnown RBP2.53□□□□□ -2
SEC1YDR164C EMW1P42842 904 aaKnown RBP2.53□□□□□ -2
SEC1YDR164C NUP42P49686 430 aaKnown RBP2.53□□□□□ -2
SEC1YDR164C MKS1P34072 584 aa2.52□□□□□ -2.01
SEC1YDR164C CEM1P39525 442 aa2.52□□□□□ -2.01
SEC1YDR164C CUZ1P53899 274 aa2.52□□□□□ -2.01
SEC1YDR164C MMP1Q12372 583 aa2.52□□□□□ -2.01
SEC1YDR164C HST2P53686 357 aa2.51□□□□□ -2.01
SEC1YDR164C DIT2P21595 489 aa2.51□□□□□ -2.01
SEC1YDR164C ESS1P22696 170 aa2.51□□□□□ -2.01
SEC1YDR164C SBE2P42223 864 aaKnown RBP2.51□□□□□ -2.01
SEC1YDR164C BDS1Q08347 646 aa2.51□□□□□ -2.01
SEC1YDR164C DSF2P38213 736 aa2.5□□□□□ -2.01
SEC1YDR164C YMR187CQ03236 431 aa2.5□□□□□ -2.01
SEC1YDR164C TDA6Q06466 467 aa2.5□□□□□ -2.01
SEC1YDR164C GLN1P32288 370 aaKnown RBP2.49□□□□□ -2.01
SEC1YDR164C SKN7P38889 622 aa2.49□□□□□ -2.01
SEC1YDR164C ADE12P80210 433 aaKnown RBP2.49□□□□□ -2.01
SEC1YDR164C YJU3P28321 313 aa2.49□□□□□ -2.01
SEC1YDR164C YMR265CQ03508 461 aaKnown RBP2.48□□□□□ -2.01
SEC1YDR164C YNR014WP53719 212 aa2.47□□□□□ -2.01
SEC1YDR164C FBP26P32604 452 aa2.46□□□□□ -2.02
SEC1YDR164C FIG4P42837 879 aa2.46□□□□□ -2.02
SEC1YDR164C VTC4P47075 721 aa2.46□□□□□ -2.02
SEC1YDR164C SYT1Q06836 1226 aa2.46□□□□□ -2.02
SEC1YDR164C KRE33P53914 1056 aaKnown RBP2.46□□□□□ -2.02
SEC1YDR164C STE6P12866 1290 aa2.45□□□□□ -2.02
SEC1YDR164C DIT1P21623 536 aa2.45□□□□□ -2.02
SEC1YDR164C SPB4P25808 606 aaPredicted RBP2.45□□□□□ -2.02
SEC1YDR164C DAL1P32375 460 aa2.45□□□□□ -2.02
SEC1YDR164C RSC30P38781 883 aa2.44□□□□□ -2.02
SEC1YDR164C ARG8P18544 423 aa2.44□□□□□ -2.02
SEC1YDR164C YCK2P23292 546 aaKnown RBP2.44□□□□□ -2.02
SEC1YDR164C MAC1P35192 417 aa2.44□□□□□ -2.02
SEC1YDR164C MCX1P38323 520 aaPredicted RBP2.44□□□□□ -2.02
SEC1YDR164C DLD3P39976 496 aaKnown RBP2.44□□□□□ -2.02
SEC1YDR164C PKH3Q03306 898 aaPredicted RBP2.44□□□□□ -2.02
SEC1YDR164C UBP15P50101 1230 aa2.43□□□□□ -2.02
SEC1YDR164C AMN1P38285 549 aaPredicted RBP2.43□□□□□ -2.02
SEC1YDR164C SLN1P39928 1220 aaPredicted RBP2.43□□□□□ -2.02
SEC1YDR164C BOI2P39969 1040 aa2.43□□□□□ -2.02
SEC1YDR164C ATF2P53296 535 aa2.43□□□□□ -2.02
SEC1YDR164C MCA1Q08601 432 aa2.43□□□□□ -2.02
SEC1YDR164C TEC1P18412 486 aa2.42□□□□□ -2.02
SEC1YDR164C YDR215CQ12240 137 aa2.42□□□□□ -2.02
SEC1YDR164C YDR461C-AQ2V2P7 80 aa2.42□□□□□ -2.02
SEC1YDR164C GLT1Q12680 2145 aaKnown RBP2.42□□□□□ -2.02
SEC1YDR164C LSB6P42951 607 aa2.42□□□□□ -2.02
SEC1YDR164C ISU1Q03020 165 aa2.42□□□□□ -2.02
SEC1YDR164C TAT1P38085 619 aa2.4□□□□□ -2.02
SEC1YDR164C ATG20Q07528 640 aa2.4□□□□□ -2.02
SEC1YDR164C RPP2BP02400 110 aaKnown RBP2.4□□□□□ -2.03
SEC1YDR164C GPM1P00950 247 aaKnown RBP2.39□□□□□ -2.03
SEC1YDR164C YPR084WQ06821 456 aa2.39□□□□□ -2.03
SEC1YDR164C TY1A-DR3Q12441 440 aa2.39□□□□□ -2.03
SEC1YDR164C KTR1P27810 393 aaKnown RBP2.39□□□□□ -2.03
SEC1YDR164C SLA1P32790 1244 aa2.39□□□□□ -2.03
SEC1YDR164C AHP1P38013 176 aaKnown RBP2.39□□□□□ -2.03
SEC1YDR164C IRC24P40580 263 aa2.39□□□□□ -2.03
SEC1YDR164C ALO1P54783 526 aaKnown RBP2.39□□□□□ -2.03
SEC1YDR164C FPS1P23900 669 aa2.38□□□□□ -2.03
SEC1YDR164C MET1P36150 593 aa2.38□□□□□ -2.03
SEC1YDR164C SSN3P39073 555 aa2.38□□□□□ -2.03
SEC1YDR164C MSN5P52918 1224 aa2.38□□□□□ -2.03
SEC1YDR164C GUT2P32191 649 aa2.37□□□□□ -2.03
SEC1YDR164C PRY1P47032 299 aa2.37□□□□□ -2.03
SEC1YDR164C WTM2Q12206 467 aa2.37□□□□□ -2.03
SEC1YDR164C DAT1P13483 248 aaKnown RBP2.37□□□□□ -2.03
SEC1YDR164C OMA1P36163 345 aa2.36□□□□□ -2.03
SEC1YDR164C NAF1P53919 492 aaKnown RBP2.36□□□□□ -2.03
SEC1YDR164C UTP7P40055 554 aaKnown RBP2.36□□□□□ -2.03
SEC1YDR164C YPL034WQ03083 165 aa2.36□□□□□ -2.03
SEC1YDR164C RAD59Q12223 238 aa2.36□□□□□ -2.03
SEC1YDR164C GLC3P32775 704 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms