RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A NAM8Q00539 523 aaKnown RBP4.14□□□□□ -1.75
TFB5YDR079C-A YMR187CQ03236 431 aa4.13□□□□□ -1.75
TFB5YDR079C-A TDA6Q06466 467 aa4.13□□□□□ -1.75
TFB5YDR079C-A SIT4P20604 311 aa4.12□□□□□ -1.75
TFB5YDR079C-A YPR148CQ06523 435 aa4.12□□□□□ -1.75
TFB5YDR079C-A ALR1Q08269 859 aa4.12□□□□□ -1.75
TFB5YDR079C-A GLT1Q12680 2145 aaKnown RBP4.12□□□□□ -1.75
TFB5YDR079C-A CDC19P00549 500 aaKnown RBP4.11□□□□□ -1.75
TFB5YDR079C-A IRC24P40580 263 aa4.1□□□□□ -1.75
TFB5YDR079C-A SBE2P42223 864 aaKnown RBP4.1□□□□□ -1.75
TFB5YDR079C-A RPA14P50106 137 aa4.1□□□□□ -1.75
TFB5YDR079C-A YPR097WQ06839 1073 aa4.1□□□□□ -1.75
TFB5YDR079C-A PSE1P32337 1089 aaKnown RBP4.09□□□□□ -1.75
TFB5YDR079C-A CUZ1P53899 274 aa4.08□□□□□ -1.76
TFB5YDR079C-A CEM1P39525 442 aa4.07□□□□□ -1.76
TFB5YDR079C-A ADE12P80210 433 aaKnown RBP4.07□□□□□ -1.76
TFB5YDR079C-A YDL206WQ12424 762 aa4.07□□□□□ -1.76
TFB5YDR079C-A YCK2P23292 546 aaKnown RBP4.05□□□□□ -1.76
TFB5YDR079C-A MAC1P35192 417 aa4.05□□□□□ -1.76
TFB5YDR079C-A AMN1P38285 549 aaPredicted RBP4.05□□□□□ -1.76
TFB5YDR079C-A MCX1P38323 520 aaPredicted RBP4.04□□□□□ -1.76
TFB5YDR079C-A YPL034WQ03083 165 aa4.04□□□□□ -1.76
TFB5YDR079C-A TBF1Q02457 562 aa4.01□□□□□ -1.77
TFB5YDR079C-A SYT1Q06836 1226 aa4.01□□□□□ -1.77
TFB5YDR079C-A YDR215CQ12240 137 aa4.01□□□□□ -1.77
TFB5YDR079C-A SLY41P22215 453 aa4□□□□□ -1.77
TFB5YDR079C-A VAC17P25591 423 aa4□□□□□ -1.77
TFB5YDR079C-A NIS1P53939 407 aa4□□□□□ -1.77
TFB5YDR079C-A EMW1P42842 904 aaKnown RBP3.99□□□□□ -1.77
TFB5YDR079C-A VTC4P47075 721 aa3.99□□□□□ -1.77
TFB5YDR079C-A PUS6P53294 404 aa3.99□□□□□ -1.77
TFB5YDR079C-A YNR014WP53719 212 aa3.99□□□□□ -1.77
TFB5YDR079C-A APP1P53933 587 aa3.98□□□□□ -1.77
TFB5YDR079C-A MCA1Q08601 432 aa3.98□□□□□ -1.77
TFB5YDR079C-A LSB6P42951 607 aa3.97□□□□□ -1.77
TFB5YDR079C-A SLN1P39928 1220 aaPredicted RBP3.96□□□□□ -1.78
TFB5YDR079C-A VPS70P47161 811 aa3.95□□□□□ -1.78
TFB5YDR079C-A DIT1P21623 536 aa3.94□□□□□ -1.78
TFB5YDR079C-A TRM1P15565 570 aaKnown RBP3.93□□□□□ -1.78
TFB5YDR079C-A TEA1P47988 759 aa3.93□□□□□ -1.78
TFB5YDR079C-A YMR265CQ03508 461 aaKnown RBP3.93□□□□□ -1.78
TFB5YDR079C-A ITT1Q04638 464 aa3.93□□□□□ -1.78
TFB5YDR079C-A DFG5Q05031 458 aa3.93□□□□□ -1.78
TFB5YDR079C-A YDR461C-AQ2V2P7 80 aa3.93□□□□□ -1.78
TFB5YDR079C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
TFB5YDR079C-A INP52P50942 1183 aa3.92□□□□□ -1.78
TFB5YDR079C-A MKS1P34072 584 aa3.91□□□□□ -1.78
TFB5YDR079C-A BOI2P39969 1040 aa3.91□□□□□ -1.78
TFB5YDR079C-A ALO1P54783 526 aaKnown RBP3.91□□□□□ -1.78
TFB5YDR079C-A DAL1P32375 460 aa3.9□□□□□ -1.79
TFB5YDR079C-A FPK1P53739 893 aa3.9□□□□□ -1.79
TFB5YDR079C-A KRE33P53914 1056 aaKnown RBP3.9□□□□□ -1.79
TFB5YDR079C-A TAT1P38085 619 aa3.89□□□□□ -1.79
TFB5YDR079C-A GPM1P00950 247 aaKnown RBP3.88□□□□□ -1.79
TFB5YDR079C-A OMA1P36163 345 aa3.88□□□□□ -1.79
TFB5YDR079C-A BDS1Q08347 646 aa3.88□□□□□ -1.79
TFB5YDR079C-A UBP15P50101 1230 aa3.87□□□□□ -1.79
TFB5YDR079C-A YMR196WQ04336 1088 aa3.87□□□□□ -1.79
TFB5YDR079C-A AVT1P47082 602 aa3.86□□□□□ -1.79
TFB5YDR079C-A STE6P12866 1290 aa3.84□□□□□ -1.79
TFB5YDR079C-A FBP26P32604 452 aa3.83□□□□□ -1.8
TFB5YDR079C-A MET1P36150 593 aa3.82□□□□□ -1.8
TFB5YDR079C-A PRY1P47032 299 aa3.81□□□□□ -1.8
TFB5YDR079C-A PBS2P08018 668 aa3.8□□□□□ -1.8
TFB5YDR079C-A SCJ1P25303 377 aa3.8□□□□□ -1.8
TFB5YDR079C-A NAF1P53919 492 aaKnown RBP3.8□□□□□ -1.8
TFB5YDR079C-A HST2P53686 357 aa3.79□□□□□ -1.8
TFB5YDR079C-A AOS1Q06624 347 aa3.79□□□□□ -1.8
TFB5YDR079C-A SLA1P32790 1244 aa3.78□□□□□ -1.8
TFB5YDR079C-A GIS1Q03833 894 aa3.77□□□□□ -1.81
TFB5YDR079C-A MAM3Q12296 706 aa3.77□□□□□ -1.81
TFB5YDR079C-A TY1A-DR3Q12441 440 aa3.77□□□□□ -1.81
TFB5YDR079C-A KNS1P32350 737 aaPredicted RBP3.76□□□□□ -1.81
TFB5YDR079C-A PDC5P16467 563 aaKnown RBP3.75□□□□□ -1.81
TFB5YDR079C-A MSN5P52918 1224 aa3.75□□□□□ -1.81
TFB5YDR079C-A FPS1P23900 669 aa3.74□□□□□ -1.81
TFB5YDR079C-A ELM1P32801 640 aa3.74□□□□□ -1.81
TFB5YDR079C-A IES2P40154 320 aa3.74□□□□□ -1.81
TFB5YDR079C-A FIG4P42837 879 aa3.74□□□□□ -1.81
TFB5YDR079C-A DLD3P39976 496 aaKnown RBP3.73□□□□□ -1.81
TFB5YDR079C-A MMP1Q12372 583 aa3.73□□□□□ -1.81
TFB5YDR079C-A SSN3P39073 555 aa3.72□□□□□ -1.81
TFB5YDR079C-A NUP42P49686 430 aaKnown RBP3.71□□□□□ -1.82
TFB5YDR079C-A ISU1Q03020 165 aa3.71□□□□□ -1.82
TFB5YDR079C-A RSC30P38781 883 aa3.7□□□□□ -1.82
TFB5YDR079C-A RPP2BP02400 110 aaKnown RBP3.68□□□□□ -1.82
TFB5YDR079C-A ESS1P22696 170 aa3.68□□□□□ -1.82
TFB5YDR079C-A PGM1P33401 570 aaKnown RBP3.68□□□□□ -1.82
TFB5YDR079C-A AHP1P38013 176 aaKnown RBP3.68□□□□□ -1.82
TFB5YDR079C-A TPS3P38426 1054 aaKnown RBP3.68□□□□□ -1.82
TFB5YDR079C-A CKB1P43639 278 aa3.68□□□□□ -1.82
TFB5YDR079C-A YJU3P28321 313 aa3.67□□□□□ -1.82
TFB5YDR079C-A GLN1P32288 370 aaKnown RBP3.67□□□□□ -1.82
TFB5YDR079C-A BUD9P53226 547 aa3.66□□□□□ -1.82
TFB5YDR079C-A YPR084WQ06821 456 aa3.66□□□□□ -1.82
TFB5YDR079C-A YKR073CP36153 106 aa3.65□□□□□ -1.83
TFB5YDR079C-A TY1A-DR2Q03964 440 aaKnown RBP3.65□□□□□ -1.83
TFB5YDR079C-A TEC1P18412 486 aa3.63□□□□□ -1.83
TFB5YDR079C-A DSF2P38213 736 aa3.63□□□□□ -1.83
TFB5YDR079C-A ATG20Q07528 640 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms