RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C MAM3Q12296 706 aa8.6□□□□□ -1.03
YDR008CYDR008C RTT106P40161 455 aa8.59□□□□□ -1.03
YDR008CYDR008C PHM7Q12252 991 aa8.59□□□□□ -1.03
YDR008CYDR008C TBF1Q02457 562 aa8.58□□□□□ -1.04
YDR008CYDR008C YBL086CP38177 466 aa8.57□□□□□ -1.04
YDR008CYDR008C OSH7P38755 437 aa8.57□□□□□ -1.04
YDR008CYDR008C IES2P40154 320 aa8.57□□□□□ -1.04
YDR008CYDR008C SCJ1P25303 377 aa8.56□□□□□ -1.04
YDR008CYDR008C ITT1Q04638 464 aa8.56□□□□□ -1.04
YDR008CYDR008C TRM1P15565 570 aaKnown RBP8.55□□□□□ -1.04
YDR008CYDR008C CKB1P43639 278 aa8.53□□□□□ -1.04
YDR008CYDR008C NUP42P49686 430 aaKnown RBP8.52□□□□□ -1.05
YDR008CYDR008C YMR196WQ04336 1088 aa8.52□□□□□ -1.05
YDR008CYDR008C LYS5P50113 272 aa8.5□□□□□ -1.05
YDR008CYDR008C NSG2P53898 299 aa8.5□□□□□ -1.05
YDR008CYDR008C VAC17P25591 423 aa8.49□□□□□ -1.05
YDR008CYDR008C JJJ3P47138 172 aa8.49□□□□□ -1.05
YDR008CYDR008C APP1P53933 587 aa8.49□□□□□ -1.05
YDR008CYDR008C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
YDR008CYDR008C YFL066CP43538 392 aa8.46□□□□□ -1.06
YDR008CYDR008C NAM8Q00539 523 aaKnown RBP8.46□□□□□ -1.06
YDR008CYDR008C CCT8P47079 568 aaKnown RBP8.45□□□□□ -1.06
YDR008CYDR008C THI72Q08579 599 aa8.45□□□□□ -1.06
YDR008CYDR008C DSF2P38213 736 aa8.44□□□□□ -1.06
YDR008CYDR008C DIT2P21595 489 aa8.43□□□□□ -1.06
YDR008CYDR008C EMW1P42842 904 aaKnown RBP8.39□□□□□ -1.07
YDR008CYDR008C HST2P53686 357 aa8.39□□□□□ -1.07
YDR008CYDR008C CDC19P00549 500 aaKnown RBP8.37□□□□□ -1.07
YDR008CYDR008C MMP1Q12372 583 aa8.35□□□□□ -1.07
YDR008CYDR008C AI1P03875 834 aa8.33□□□□□ -1.08
YDR008CYDR008C ESS1P22696 170 aa8.33□□□□□ -1.08
YDR008CYDR008C DFG5Q05031 458 aa8.33□□□□□ -1.08
YDR008CYDR008C YJU3P28321 313 aa8.3□□□□□ -1.08
YDR008CYDR008C CUZ1P53899 274 aa8.29□□□□□ -1.08
YDR008CYDR008C MKS1P34072 584 aa8.27□□□□□ -1.09
YDR008CYDR008C YPR053CQ6Q5F3 151 aa8.26□□□□□ -1.09
YDR008CYDR008C SBP1P10080 294 aaKnown RBP8.25□□□□□ -1.09
YDR008CYDR008C GLN1P32288 370 aaKnown RBP8.25□□□□□ -1.09
YDR008CYDR008C RSC30P38781 883 aa8.24□□□□□ -1.09
YDR008CYDR008C SBE2P42223 864 aaKnown RBP8.21□□□□□ -1.1
YDR008CYDR008C BDS1Q08347 646 aa8.21□□□□□ -1.1
YDR008CYDR008C CEM1P39525 442 aa8.2□□□□□ -1.1
YDR008CYDR008C FIG4P42837 879 aa8.2□□□□□ -1.1
YDR008CYDR008C SKN7P38889 622 aa8.19□□□□□ -1.1
YDR008CYDR008C TDA6Q06466 467 aa8.18□□□□□ -1.1
YDR008CYDR008C VTC4P47075 721 aa8.17□□□□□ -1.1
YDR008CYDR008C STE6P12866 1290 aa8.14□□□□□ -1.11
YDR008CYDR008C FBP26P32604 452 aa8.14□□□□□ -1.11
YDR008CYDR008C YMR187CQ03236 431 aa8.13□□□□□ -1.11
YDR008CYDR008C SYT1Q06836 1226 aa8.12□□□□□ -1.11
YDR008CYDR008C SPB4P25808 606 aaPredicted RBP8.11□□□□□ -1.11
YDR008CYDR008C DAL1P32375 460 aa8.1□□□□□ -1.11
YDR008CYDR008C ADE12P80210 433 aaKnown RBP8.1□□□□□ -1.11
YDR008CYDR008C KTR1P27810 393 aaKnown RBP8.08□□□□□ -1.12
YDR008CYDR008C YMR265CQ03508 461 aaKnown RBP8.08□□□□□ -1.12
YDR008CYDR008C PKH3Q03306 898 aaPredicted RBP8.07□□□□□ -1.12
YDR008CYDR008C DIT1P21623 536 aa8.05□□□□□ -1.12
YDR008CYDR008C YCK2P23292 546 aaKnown RBP8.05□□□□□ -1.12
YDR008CYDR008C YPR084WQ06821 456 aa8.05□□□□□ -1.12
YDR008CYDR008C ARG8P18544 423 aa8.04□□□□□ -1.12
YDR008CYDR008C KRE33P53914 1056 aaKnown RBP8.03□□□□□ -1.12
YDR008CYDR008C ATF2P53296 535 aa8.02□□□□□ -1.13
YDR008CYDR008C SAS10Q12136 610 aaPredicted RBP8.02□□□□□ -1.13
YDR008CYDR008C TEC1P18412 486 aa8□□□□□ -1.13
YDR008CYDR008C YNR014WP53719 212 aa8□□□□□ -1.13
YDR008CYDR008C ISU1Q03020 165 aa8□□□□□ -1.13
YDR008CYDR008C MCX1P38323 520 aaPredicted RBP7.99□□□□□ -1.13
YDR008CYDR008C UBP15P50101 1230 aa7.99□□□□□ -1.13
YDR008CYDR008C TY1A-DR3Q12441 440 aa7.99□□□□□ -1.13
YDR008CYDR008C YDR461C-AQ2V2P7 80 aa7.99□□□□□ -1.13
YDR008CYDR008C SLA1P32790 1244 aa7.98□□□□□ -1.13
YDR008CYDR008C SLN1P39928 1220 aaPredicted RBP7.97□□□□□ -1.13
YDR008CYDR008C AMN1P38285 549 aaPredicted RBP7.96□□□□□ -1.14
YDR008CYDR008C MCA1Q08601 432 aa7.96□□□□□ -1.14
YDR008CYDR008C YDR215CQ12240 137 aa7.95□□□□□ -1.14
YDR008CYDR008C ATG20Q07528 640 aa7.94□□□□□ -1.14
YDR008CYDR008C SSN3P39073 555 aa7.93□□□□□ -1.14
YDR008CYDR008C DLD3P39976 496 aaKnown RBP7.93□□□□□ -1.14
YDR008CYDR008C GPM1P00950 247 aaKnown RBP7.9□□□□□ -1.14
YDR008CYDR008C BOI2P39969 1040 aa7.89□□□□□ -1.15
YDR008CYDR008C GLC3P32775 704 aa7.88□□□□□ -1.15
YDR008CYDR008C LSB6P42951 607 aa7.88□□□□□ -1.15
YDR008CYDR008C MSN5P52918 1224 aa7.88□□□□□ -1.15
YDR008CYDR008C RAD59Q12223 238 aa7.87□□□□□ -1.15
YDR008CYDR008C GLT1Q12680 2145 aaKnown RBP7.87□□□□□ -1.15
YDR008CYDR008C WTM2Q12206 467 aa7.85□□□□□ -1.15
YDR008CYDR008C GUT2P32191 649 aa7.83□□□□□ -1.16
YDR008CYDR008C MAC1P35192 417 aa7.81□□□□□ -1.16
YDR008CYDR008C AHP1P38013 176 aaKnown RBP7.79□□□□□ -1.16
YDR008CYDR008C CSN12P47130 423 aa7.79□□□□□ -1.16
YDR008CYDR008C RPP2BP02400 110 aaKnown RBP7.78□□□□□ -1.16
YDR008CYDR008C FPS1P23900 669 aa7.78□□□□□ -1.16
YDR008CYDR008C TAT1P38085 619 aa7.78□□□□□ -1.16
YDR008CYDR008C PRY1P47032 299 aa7.78□□□□□ -1.16
YDR008CYDR008C YNR021WP53723 404 aaKnown RBP7.76□□□□□ -1.17
YDR008CYDR008C FRA1Q07825 749 aa7.76□□□□□ -1.17
YDR008CYDR008C DAT1P13483 248 aaKnown RBP7.75□□□□□ -1.17
YDR008CYDR008C UTP7P40055 554 aaKnown RBP7.75□□□□□ -1.17
YDR008CYDR008C ALO1P54783 526 aaKnown RBP7.75□□□□□ -1.17
YDR008CYDR008C NAF1P53919 492 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms