RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 EIF2AK4Q9P2K8 1649 aaKnown RBP23.43■■□□□ 1.34
PHGDH-216ENST00000641375 DEPDC5O75140 1603 aa23.42■■□□□ 1.34
PHGDH-216ENST00000641375 DHX29Q7Z478 1369 aaKnown RBP23.4■■□□□ 1.34
PHGDH-216ENST00000641375 DIP2BQ9P265 1576 aa23.39■■□□□ 1.33
PHGDH-216ENST00000641375 MLH3Q9UHC1 1453 aa23.39■■□□□ 1.33
PHGDH-216ENST00000641375 HECW2Q9P2P5 1572 aa23.38■■□□□ 1.33
PHGDH-216ENST00000641375 KANK1Q14678 1352 aa23.33■■□□□ 1.33
PHGDH-216ENST00000641375 CCDC144AA2RUR9 1427 aa23.33■■□□□ 1.33
PHGDH-216ENST00000641375 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.32
PHGDH-216ENST00000641375 ATP10AO60312 1499 aa23.32■■□□□ 1.32
PHGDH-216ENST00000641375 PRDM15P57071 1507 aaPredicted RBP23.31■■□□□ 1.32
PHGDH-216ENST00000641375 A2MP01023 1474 aa23.31■■□□□ 1.32
PHGDH-216ENST00000641375 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
PHGDH-216ENST00000641375 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
PHGDH-216ENST00000641375 KIF3BO15066 747 aa23.3■■□□□ 1.32
PHGDH-216ENST00000641375 TET3O43151 1660 aa23.3■■□□□ 1.32
PHGDH-216ENST00000641375 PLA2R1Q13018 1463 aa23.28■■□□□ 1.32
PHGDH-216ENST00000641375 E9PCH4 1651 aa23.28■■□□□ 1.32
PHGDH-216ENST00000641375 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
PHGDH-216ENST00000641375 NBPF8Q3BBV2 869 aa23.26■■□□□ 1.31
PHGDH-216ENST00000641375 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
PHGDH-216ENST00000641375 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
PHGDH-216ENST00000641375 BCORL1Q5H9F3 1711 aa23.25■■□□□ 1.31
PHGDH-216ENST00000641375 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
PHGDH-216ENST00000641375 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
PHGDH-216ENST00000641375 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.317e-14■■■■■ 63.8
PHGDH-216ENST00000641375 TSPOAP1O95153 1857 aa23.23■■□□□ 1.31
PHGDH-216ENST00000641375 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
PHGDH-216ENST00000641375 PPRC1Q5VV67 1664 aaKnown RBP23.23■■□□□ 1.31
PHGDH-216ENST00000641375 SPHKAPQ2M3C7 1700 aa23.22■■□□□ 1.31
PHGDH-216ENST00000641375 MIER1Q8N108 512 aa23.21■■□□□ 1.31
PHGDH-216ENST00000641375 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
PHGDH-216ENST00000641375 DIP2CQ9Y2E4 1556 aa23.2■■□□□ 1.3
PHGDH-216ENST00000641375 TRPM2O94759 1503 aa23.2■■□□□ 1.3
PHGDH-216ENST00000641375 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
PHGDH-216ENST00000641375 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
PHGDH-216ENST00000641375 LMTK2Q8IWU2 1503 aa23.19■■□□□ 1.3
PHGDH-216ENST00000641375 PTPRTO14522 1441 aa23.18■■□□□ 1.3
PHGDH-216ENST00000641375 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
PHGDH-216ENST00000641375 ZMYM4Q5VZL5 1548 aa23.18■■□□□ 1.3
PHGDH-216ENST00000641375 DCAF11Q8TEB1 546 aa23.16■■□□□ 1.3
PHGDH-216ENST00000641375 EFCAB6Q5THR3 1501 aa23.16■■□□□ 1.3
PHGDH-216ENST00000641375 ZNF326Q5BKZ1 582 aaKnown RBP23.14■■□□□ 1.3
PHGDH-216ENST00000641375 RALGAPBQ86X10 1494 aa23.14■■□□□ 1.3
PHGDH-216ENST00000641375 CEP152O94986 1710 aa23.14■■□□□ 1.29
PHGDH-216ENST00000641375 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
PHGDH-216ENST00000641375 SPATA31E1Q6ZUB1 1445 aa23.11■■□□□ 1.29
PHGDH-216ENST00000641375 KDM2AQ9Y2K7 1162 aa23.11■■□□□ 1.29
PHGDH-216ENST00000641375 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
PHGDH-216ENST00000641375 YEATS2Q9ULM3 1422 aa23.09■■□□□ 1.29
PHGDH-216ENST00000641375 CLTCL1P53675 1640 aa23.09■■□□□ 1.29
PHGDH-216ENST00000641375 GGT6Q6P531 493 aa23.08■■□□□ 1.29
PHGDH-216ENST00000641375 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
PHGDH-216ENST00000641375 NEURL4Q96JN8 1562 aa23.07■■□□□ 1.28
PHGDH-216ENST00000641375 POLR1AO95602 1720 aaPredicted RBP23.06■■□□□ 1.28
PHGDH-216ENST00000641375 TRPM1Q7Z4N2 1603 aa23.05■■□□□ 1.28
PHGDH-216ENST00000641375 ABCC3O15438 1527 aa23.05■■□□□ 1.28
PHGDH-216ENST00000641375 ZC3H13Q5T200 1668 aaKnown RBP23.05■■□□□ 1.28
PHGDH-216ENST00000641375 USP47Q96K76 1375 aa23.04■■□□□ 1.28
PHGDH-216ENST00000641375 STAC3Q96MF2 364 aa23.04■■□□□ 1.28
PHGDH-216ENST00000641375 WASHC2CQ9Y4E1 1318 aa23.04■■□□□ 1.28
PHGDH-216ENST00000641375 REREQ9P2R6 1566 aa23.03■■□□□ 1.28
PHGDH-216ENST00000641375 KIF1BO60333 1816 aa23.02■■□□□ 1.28
PHGDH-216ENST00000641375 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
PHGDH-216ENST00000641375 WASHC2AQ641Q2 1341 aa23.02■■□□□ 1.28
PHGDH-216ENST00000641375 CARD11Q9BXL7 1154 aa23.02■■□□□ 1.28
PHGDH-216ENST00000641375 NPATQ14207 1427 aa23■■□□□ 1.27
PHGDH-216ENST00000641375 ROCK2O75116 1388 aaKnown RBP23■■□□□ 1.27
PHGDH-216ENST00000641375 LAMC1P11047 1609 aa22.98■■□□□ 1.27
PHGDH-216ENST00000641375 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
PHGDH-216ENST00000641375 CCDC7Q96M83 1385 aa22.97■■□□□ 1.27
PHGDH-216ENST00000641375 AGLP35573 1532 aa22.96■■□□□ 1.27
PHGDH-216ENST00000641375 GPRASP1Q5JY77 1395 aa22.96■■□□□ 1.27
PHGDH-216ENST00000641375 ARHGAP31Q2M1Z3 1444 aa22.95■■□□□ 1.26
PHGDH-216ENST00000641375 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
PHGDH-216ENST00000641375 UGGT1Q9NYU2 1555 aa22.94■■□□□ 1.26
PHGDH-216ENST00000641375 MADDQ8WXG6 1647 aa22.94■■□□□ 1.26
PHGDH-216ENST00000641375 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-216ENST00000641375 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-216ENST00000641375 ARID4BQ4LE39 1312 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-216ENST00000641375 ARHGEF40Q8TER5 1519 aa22.92■■□□□ 1.26
PHGDH-216ENST00000641375 ANP32CO43423 234 aa22.91■■□□□ 1.26
PHGDH-216ENST00000641375 NOS1P29475 1434 aa22.91■■□□□ 1.26
PHGDH-216ENST00000641375 KIF7Q2M1P5 1343 aa22.9■■□□□ 1.26
PHGDH-216ENST00000641375 PPP6R1Q9UPN7 881 aa22.9■■□□□ 1.26
PHGDH-216ENST00000641375 SIGLEC1Q9BZZ2 1709 aa22.89■■□□□ 1.25
PHGDH-216ENST00000641375 ADGRB3O60242 1522 aa22.89■■□□□ 1.25
PHGDH-216ENST00000641375 CENPBP07199 599 aaPredicted RBP22.89■■□□□ 1.25
PHGDH-216ENST00000641375 MROH2AA6NES4 1674 aa22.88■■□□□ 1.25
PHGDH-216ENST00000641375 IFT172Q9UG01 1749 aa22.88■■□□□ 1.25
PHGDH-216ENST00000641375 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
PHGDH-216ENST00000641375 MYOM2P54296 1465 aa22.87■■□□□ 1.25
PHGDH-216ENST00000641375 KIAA1210Q9ULL0 1709 aa22.86■■□□□ 1.25
PHGDH-216ENST00000641375 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
PHGDH-216ENST00000641375 ST20-MTHFSA0A0A6YYL1 179 aa22.86■■□□□ 1.25
PHGDH-216ENST00000641375 SYNMO15061 1565 aa22.84■■□□□ 1.25
PHGDH-216ENST00000641375 YTHDC1Q96MU7 727 aaKnown RBP22.82■■□□□ 1.24
PHGDH-216ENST00000641375 PREX1Q8TCU6 1659 aa22.82■■□□□ 1.24
PHGDH-216ENST00000641375 CCER2I3L3R5 266 aa22.81■■□□□ 1.24
PHGDH-216ENST00000641375 PPLO60437 1756 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms