RNA–Protein interactions for RNA: ENST00000641162.1

CASC19-213, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-213ENST00000641162 PLPP6Q8IY26 295 aa9.93□□□□□ -0.82
CASC19-213ENST00000641162 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
CASC19-213ENST00000641162 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
CASC19-213ENST00000641162 BAZ1BQ9UIG0 1483 aaKnown RBP9.91□□□□□ -0.82
CASC19-213ENST00000641162 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
CASC19-213ENST00000641162 CYB5RLQ6IPT4 315 aa9.91□□□□□ -0.82
CASC19-213ENST00000641162 DSG2Q14126 1118 aa9.9□□□□□ -0.82
CASC19-213ENST00000641162 HRO43593 1189 aa9.89□□□□□ -0.83
CASC19-213ENST00000641162 RYDENQ9NUL5 291 aaKnown RBP9.89□□□□□ -0.83
CASC19-213ENST00000641162 MRC2Q9UBG0 1479 aa9.89□□□□□ -0.83
CASC19-213ENST00000641162 TRIM26Q12899 539 aaPredicted RBP9.88□□□□□ -0.83
CASC19-213ENST00000641162 RIMBP3CA6NJZ7 1639 aa9.88□□□□□ -0.83
CASC19-213ENST00000641162 RIMBP3BA6NNM3 1639 aa9.88□□□□□ -0.83
CASC19-213ENST00000641162 RIMBP3Q9UFD9 1639 aa9.88□□□□□ -0.83
CASC19-213ENST00000641162 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
CASC19-213ENST00000641162 TTBK1Q5TCY1 1321 aaPredicted RBP9.86□□□□□ -0.83
CASC19-213ENST00000641162 DMRTA1Q5VZB9 504 aa9.86□□□□□ -0.83
CASC19-213ENST00000641162 KCNH8Q96L42 1107 aa9.86□□□□□ -0.83
CASC19-213ENST00000641162 PSEN2P49810 448 aa9.85□□□□□ -0.83
CASC19-213ENST00000641162 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
CASC19-213ENST00000641162 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
CASC19-213ENST00000641162 OXER1Q8TDS5 423 aa9.84□□□□□ -0.83
CASC19-213ENST00000641162 SMARCA4P51532 1647 aa9.83□□□□□ -0.84
CASC19-213ENST00000641162 WDR62O43379 1518 aa9.82□□□□□ -0.84
CASC19-213ENST00000641162 MYT1Q01538 1121 aa9.82□□□□□ -0.84
CASC19-213ENST00000641162 CRISPLD2Q9H0B8 497 aa9.81□□□□□ -0.84
CASC19-213ENST00000641162 CADPSQ9ULU8 1353 aa9.8□□□□□ -0.84
CASC19-213ENST00000641162 STAC3Q96MF2 364 aa9.8□□□□□ -0.84
CASC19-213ENST00000641162 ARHGEF11O15085 1522 aa9.8□□□□□ -0.84
CASC19-213ENST00000641162 NKX1-1Q15270 411 aaPredicted RBP9.79□□□□□ -0.84
CASC19-213ENST00000641162 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
CASC19-213ENST00000641162 SLC4A5Q9BY07 1137 aa9.79□□□□□ -0.84
CASC19-213ENST00000641162 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
CASC19-213ENST00000641162 VPS9D1Q9Y2B5 631 aa9.77□□□□□ -0.85
CASC19-213ENST00000641162 PPP1R15BQ5SWA1 713 aa9.76□□□□□ -0.85
CASC19-213ENST00000641162 KCTD12Q96CX2 325 aaKnown RBP9.76□□□□□ -0.85
CASC19-213ENST00000641162 CEP164Q9UPV0 1460 aa9.76□□□□□ -0.85
CASC19-213ENST00000641162 PDE4AP27815 886 aa9.74□□□□□ -0.85
CASC19-213ENST00000641162 ZNF454Q8N9F8 522 aa9.74□□□□□ -0.85
CASC19-213ENST00000641162 HRCP23327 699 aa9.73□□□□□ -0.85
CASC19-213ENST00000641162 FOSBP53539 338 aa9.73□□□□□ -0.85
CASC19-213ENST00000641162 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
CASC19-213ENST00000641162 ANO8Q9HCE9 1232 aaPredicted RBP9.73□□□□□ -0.85
CASC19-213ENST00000641162 PTPREP23469 700 aa9.71□□□□□ -0.86
CASC19-213ENST00000641162 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
CASC19-213ENST00000641162 NCKAP5LQ9HCH0 1330 aa9.71□□□□□ -0.86
CASC19-213ENST00000641162 BHMG1C9JSJ3 638 aaPredicted RBP9.7□□□□□ -0.86
CASC19-213ENST00000641162 IFFO2Q5TF58 517 aa9.69□□□□□ -0.86
CASC19-213ENST00000641162 FANCD2Q9BXW9 1451 aa9.69□□□□□ -0.86
CASC19-213ENST00000641162 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
CASC19-213ENST00000641162 ZBED2Q9BTP6 218 aa9.67□□□□□ -0.86
CASC19-213ENST00000641162 ARAP1Q96P48 1450 aa9.66□□□□□ -0.86
CASC19-213ENST00000641162 EVI5O60447 810 aa9.66□□□□□ -0.86
CASC19-213ENST00000641162 RGS20O76081 388 aa9.66□□□□□ -0.86
CASC19-213ENST00000641162 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
CASC19-213ENST00000641162 PEG3Q9GZU2 1588 aa9.66□□□□□ -0.86
CASC19-213ENST00000641162 DDX27Q96GQ7 796 aaKnown RBP9.65□□□□□ -0.86
CASC19-213ENST00000641162 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
CASC19-213ENST00000641162 MFSD10Q14728 455 aa9.64□□□□□ -0.87
CASC19-213ENST00000641162 THSD4Q6ZMP0 1018 aa9.64□□□□□ -0.87
CASC19-213ENST00000641162 PTPN5P54829 565 aa9.63□□□□□ -0.87
CASC19-213ENST00000641162 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
CASC19-213ENST00000641162 LARP6Q9BRS8 491 aaKnown RBP9.63□□□□□ -0.87
CASC19-213ENST00000641162 NBPF3Q9H094 633 aa9.63□□□□□ -0.87
CASC19-213ENST00000641162 MROH2BQ7Z745 1585 aa9.63□□□□□ -0.87
CASC19-213ENST00000641162 GOLGA8CPA6NN73 597 aa9.62□□□□□ -0.87
CASC19-213ENST00000641162 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
CASC19-213ENST00000641162 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
CASC19-213ENST00000641162 ZNF608Q9ULD9 1512 aaPredicted RBP9.61□□□□□ -0.87
CASC19-213ENST00000641162 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
CASC19-213ENST00000641162 WNT2BQ93097 391 aa9.61□□□□□ -0.87
CASC19-213ENST00000641162 CCDC9Q9Y3X0 531 aaKnown RBP9.61□□□□□ -0.87
CASC19-213ENST00000641162 PPP1R3GB7ZBB8 358 aa9.59□□□□□ -0.87
CASC19-213ENST00000641162 RABGEF1Q9UJ41 708 aa9.57□□□□□ -0.88
CASC19-213ENST00000641162 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
CASC19-213ENST00000641162 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
CASC19-213ENST00000641162 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
CASC19-213ENST00000641162 PCDHGA10Q9Y5H3 936 aa9.55□□□□□ -0.88
CASC19-213ENST00000641162 A0A0G2JS52 829 aa9.54□□□□□ -0.88
CASC19-213ENST00000641162 PHF14O94880 888 aa9.54□□□□□ -0.88
CASC19-213ENST00000641162 NEUROD2Q15784 382 aa9.54□□□□□ -0.88
CASC19-213ENST00000641162 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
CASC19-213ENST00000641162 RSF1Q96T23 1441 aaPredicted RBP9.54□□□□□ -0.88
CASC19-213ENST00000641162 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
CASC19-213ENST00000641162 TYW1BQ6NUM6 668 aa9.53□□□□□ -0.88
CASC19-213ENST00000641162 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
CASC19-213ENST00000641162 LAPTM4BQ86VI4 370 aa9.53□□□□□ -0.88
CASC19-213ENST00000641162 CHD1O14646 1710 aa9.53□□□□□ -0.88
CASC19-213ENST00000641162 CFTRP13569 1480 aa9.53□□□□□ -0.88
CASC19-213ENST00000641162 ONECUT3O60422 494 aaPredicted RBP9.51□□□□□ -0.89
CASC19-213ENST00000641162 ANKK1Q8NFD2 765 aa9.51□□□□□ -0.89
CASC19-213ENST00000641162 ZMYND15Q9H091 742 aa9.51□□□□□ -0.89
CASC19-213ENST00000641162 AQRO60306 1485 aaKnown RBP eCLIP9.51□□□□□ -0.89
CASC19-213ENST00000641162 NYAP1Q6ZVC0 841 aa9.5□□□□□ -0.89
CASC19-213ENST00000641162 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
CASC19-213ENST00000641162 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
CASC19-213ENST00000641162 WIZO95785 1651 aa9.49□□□□□ -0.89
CASC19-213ENST00000641162 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
CASC19-213ENST00000641162 COL9A1P20849 921 aa9.49□□□□□ -0.89
CASC19-213ENST00000641162 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms