RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
SCARB2-227ENST00000640957 ZMYND15Q9H091 742 aa17.87■□□□□ 0.45
SCARB2-227ENST00000640957 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
SCARB2-227ENST00000640957 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
SCARB2-227ENST00000640957 PLB1Q6P1J6 1458 aa17.86■□□□□ 0.45
SCARB2-227ENST00000640957 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
SCARB2-227ENST00000640957 NLRP13Q86W25 1043 aa17.86■□□□□ 0.45
SCARB2-227ENST00000640957 BCORL1Q5H9F3 1711 aa17.85■□□□□ 0.45
SCARB2-227ENST00000640957 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
SCARB2-227ENST00000640957 NBPF1Q3BBV0 1214 aa17.83■□□□□ 0.45
SCARB2-227ENST00000640957 BCAR3O75815 825 aa17.83■□□□□ 0.44
SCARB2-227ENST00000640957 RALBP1Q15311 655 aa17.82■□□□□ 0.44
SCARB2-227ENST00000640957 LRPPRCP42704 1394 aaKnown RBP17.82■□□□□ 0.44
SCARB2-227ENST00000640957 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
SCARB2-227ENST00000640957 IQGAP2Q13576 1575 aa17.82■□□□□ 0.44
SCARB2-227ENST00000640957 DAPK1P53355 1430 aa17.81■□□□□ 0.44
SCARB2-227ENST00000640957 PANK3Q9H999 370 aa17.8■□□□□ 0.44
SCARB2-227ENST00000640957 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
SCARB2-227ENST00000640957 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
SCARB2-227ENST00000640957 IGHDP01880 384 aa17.8■□□□□ 0.44
SCARB2-227ENST00000640957 CENPQQ7L2Z9 268 aaPredicted RBP17.8■□□□□ 0.44
SCARB2-227ENST00000640957 ABCC5O15440 1437 aa17.79■□□□□ 0.44
SCARB2-227ENST00000640957 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
SCARB2-227ENST00000640957 ARID3AQ99856 593 aa17.78■□□□□ 0.44
SCARB2-227ENST00000640957 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
SCARB2-227ENST00000640957 KDM2BQ8NHM5 1336 aa17.78■□□□□ 0.44
SCARB2-227ENST00000640957 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.44
SCARB2-227ENST00000640957 NEUROD2Q15784 382 aa17.77■□□□□ 0.43
SCARB2-227ENST00000640957 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
SCARB2-227ENST00000640957 HSP90AA2PQ14568 343 aaPredicted RBP17.76■□□□□ 0.43
SCARB2-227ENST00000640957 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
SCARB2-227ENST00000640957 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
SCARB2-227ENST00000640957 ANKRD30AQ9BXX3 1397 aa17.75■□□□□ 0.43
SCARB2-227ENST00000640957 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
SCARB2-227ENST00000640957 HECW1Q76N89 1606 aa17.75■□□□□ 0.43
SCARB2-227ENST00000640957 COG6Q9Y2V7 657 aa17.74■□□□□ 0.43
SCARB2-227ENST00000640957 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
SCARB2-227ENST00000640957 PANK1Q8TE04 598 aa17.74■□□□□ 0.43
SCARB2-227ENST00000640957 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
SCARB2-227ENST00000640957 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
SCARB2-227ENST00000640957 BCL2L13Q9BXK5 485 aa17.73■□□□□ 0.43
SCARB2-227ENST00000640957 CARMIL2Q6F5E8 1435 aa17.72■□□□□ 0.43
SCARB2-227ENST00000640957 SAMD9Q5K651 1589 aa17.72■□□□□ 0.43
SCARB2-227ENST00000640957 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
SCARB2-227ENST00000640957 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
SCARB2-227ENST00000640957 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.42
SCARB2-227ENST00000640957 LRRIQ1Q96JM4 1722 aa17.71■□□□□ 0.42
SCARB2-227ENST00000640957 NUP153P49790 1475 aaKnown RBP17.7■□□□□ 0.42
SCARB2-227ENST00000640957 CLUAP1Q96AJ1 413 aa17.7■□□□□ 0.42
SCARB2-227ENST00000640957 USP19O94966 1318 aa17.7■□□□□ 0.42
SCARB2-227ENST00000640957 PLEKHH1Q9ULM0 1364 aa17.7■□□□□ 0.42
SCARB2-227ENST00000640957 GOLGA6L3A6NEY3 463 aa17.69■□□□□ 0.42
SCARB2-227ENST00000640957 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
SCARB2-227ENST00000640957 ANKRD50Q9ULJ7 1429 aa17.69■□□□□ 0.42
SCARB2-227ENST00000640957 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
SCARB2-227ENST00000640957 TNNQ9UQP3 1299 aa17.69■□□□□ 0.42
SCARB2-227ENST00000640957 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
SCARB2-227ENST00000640957 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
SCARB2-227ENST00000640957 APAF1O14727 1248 aa17.68■□□□□ 0.42
SCARB2-227ENST00000640957 PER1O15534 1290 aaPredicted RBP17.68■□□□□ 0.42
SCARB2-227ENST00000640957 CHGAP10645 457 aaKnown RBP17.68■□□□□ 0.42
SCARB2-227ENST00000640957 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
SCARB2-227ENST00000640957 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
SCARB2-227ENST00000640957 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
SCARB2-227ENST00000640957 BECN1Q14457 450 aa17.66■□□□□ 0.42
SCARB2-227ENST00000640957 ARHGEF11O15085 1522 aa17.65■□□□□ 0.42
SCARB2-227ENST00000640957 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.42
SCARB2-227ENST00000640957 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.42
SCARB2-227ENST00000640957 PTPRGP23470 1445 aa17.64■□□□□ 0.41
SCARB2-227ENST00000640957 DISP1Q96F81 1524 aa17.64■□□□□ 0.41
SCARB2-227ENST00000640957 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
SCARB2-227ENST00000640957 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-227ENST00000640957 TNNT2P45379 298 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-227ENST00000640957 L1TD1Q5T7N2 865 aaKnown RBP17.63■□□□□ 0.41
SCARB2-227ENST00000640957 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-227ENST00000640957 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
SCARB2-227ENST00000640957 CAMSAP2Q08AD1 1489 aa17.62■□□□□ 0.41
SCARB2-227ENST00000640957 PZPP20742 1482 aa17.62■□□□□ 0.41
SCARB2-227ENST00000640957 TCOF1Q13428 1488 aaKnown RBP17.62■□□□□ 0.41
SCARB2-227ENST00000640957 MFAP1P55081 439 aaKnown RBP17.62■□□□□ 0.41
SCARB2-227ENST00000640957 WDR62O43379 1518 aa17.62■□□□□ 0.41
SCARB2-227ENST00000640957 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
SCARB2-227ENST00000640957 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
SCARB2-227ENST00000640957 PARD3Q8TEW0 1356 aa17.6■□□□□ 0.41
SCARB2-227ENST00000640957 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
SCARB2-227ENST00000640957 ROCK1Q13464 1354 aa17.6■□□□□ 0.41
SCARB2-227ENST00000640957 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
SCARB2-227ENST00000640957 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
SCARB2-227ENST00000640957 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.41
SCARB2-227ENST00000640957 TRAK2O60296 914 aa17.58■□□□□ 0.4
SCARB2-227ENST00000640957 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
SCARB2-227ENST00000640957 GCC2Q8IWJ2 1684 aa17.57■□□□□ 0.4
SCARB2-227ENST00000640957 PPP2R1AP30153 589 aa17.57■□□□□ 0.4
SCARB2-227ENST00000640957 UPF2Q9HAU5 1272 aaKnown RBP17.57■□□□□ 0.4
SCARB2-227ENST00000640957 KDM5CP41229 1560 aa17.56■□□□□ 0.4
SCARB2-227ENST00000640957 MCM4P33991 863 aa17.56■□□□□ 0.4
SCARB2-227ENST00000640957 AFAP1Q8N556 730 aa17.56■□□□□ 0.4
SCARB2-227ENST00000640957 ANTXR1Q9H6X2 564 aa17.55■□□□□ 0.4
SCARB2-227ENST00000640957 C9orf84Q5VXU9 1444 aa17.55■□□□□ 0.4
SCARB2-227ENST00000640957 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms