RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
GFAP-237ENST00000640552 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
GFAP-237ENST00000640552 SAMD9LQ8IVG5 1584 aa18.84■□□□□ 0.61
GFAP-237ENST00000640552 FAM135AQ9P2D6 1515 aa18.83■□□□□ 0.61
GFAP-237ENST00000640552 TTC37Q6PGP7 1564 aa18.83■□□□□ 0.61
GFAP-237ENST00000640552 ADGBQ8N7X0 1667 aa18.83■□□□□ 0.6
GFAP-237ENST00000640552 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
GFAP-237ENST00000640552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.82■□□□□ 0.6
GFAP-237ENST00000640552 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
GFAP-237ENST00000640552 KNSTRNQ9Y448 316 aa18.81■□□□□ 0.6
GFAP-237ENST00000640552 PNISRQ8TF01 805 aaKnown RBP18.81■□□□□ 0.6
GFAP-237ENST00000640552 PPP4R2Q9NY27 417 aa18.81■□□□□ 0.6
GFAP-237ENST00000640552 ERICH6Q7L0X2 663 aa18.8■□□□□ 0.6
GFAP-237ENST00000640552 SAFB2Q14151 953 aaKnown RBP eCLIP18.79■□□□□ 0.6
GFAP-237ENST00000640552 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
GFAP-237ENST00000640552 DHX29Q7Z478 1369 aaKnown RBP18.79■□□□□ 0.6
GFAP-237ENST00000640552 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
GFAP-237ENST00000640552 SHANK2Q9UPX8 1470 aa18.78■□□□□ 0.6
GFAP-237ENST00000640552 CFAP70Q5T0N1 1121 aa18.78■□□□□ 0.6
GFAP-237ENST00000640552 ADCY10Q96PN6 1610 aa18.78■□□□□ 0.6
GFAP-237ENST00000640552 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
GFAP-237ENST00000640552 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
GFAP-237ENST00000640552 ARHGEF12Q9NZN5 1544 aa18.77■□□□□ 0.6
GFAP-237ENST00000640552 KANK1Q14678 1352 aa18.76■□□□□ 0.59
GFAP-237ENST00000640552 PLCH2O75038 1416 aa18.76■□□□□ 0.59
GFAP-237ENST00000640552 RALBP1Q15311 655 aa18.76■□□□□ 0.59
GFAP-237ENST00000640552 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
GFAP-237ENST00000640552 CYB5RLQ6IPT4 315 aa18.75■□□□□ 0.59
GFAP-237ENST00000640552 CDC42BPBQ9Y5S2 1711 aa18.75■□□□□ 0.59
GFAP-237ENST00000640552 RAPGEF3O95398 923 aa18.75■□□□□ 0.59
GFAP-237ENST00000640552 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
GFAP-237ENST00000640552 DISP3Q9P2K9 1392 aa18.75■□□□□ 0.59
GFAP-237ENST00000640552 CDCA7LQ96GN5 454 aa18.74■□□□□ 0.59
GFAP-237ENST00000640552 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
GFAP-237ENST00000640552 BCORL1Q5H9F3 1711 aa18.73■□□□□ 0.59
GFAP-237ENST00000640552 WDR43Q15061 677 aaKnown RBP eCLIP18.73■□□□□ 0.59
GFAP-237ENST00000640552 RALGAPBQ86X10 1494 aa18.73■□□□□ 0.59
GFAP-237ENST00000640552 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
GFAP-237ENST00000640552 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
GFAP-237ENST00000640552 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
GFAP-237ENST00000640552 PLIN1O60240 522 aa18.7■□□□□ 0.58
GFAP-237ENST00000640552 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
GFAP-237ENST00000640552 CCDC146Q8IYE0 955 aa18.7■□□□□ 0.58
GFAP-237ENST00000640552 ARID4BQ4LE39 1312 aaPredicted RBP18.69■□□□□ 0.58
GFAP-237ENST00000640552 WASHC2CQ9Y4E1 1318 aa18.69■□□□□ 0.58
GFAP-237ENST00000640552 TESK2Q96S53 571 aa18.69■□□□□ 0.58
GFAP-237ENST00000640552 PREX2Q70Z35 1606 aa18.69■□□□□ 0.58
GFAP-237ENST00000640552 A2MP01023 1474 aa18.69■□□□□ 0.58
GFAP-237ENST00000640552 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
GFAP-237ENST00000640552 FANCAO15360 1455 aa18.68■□□□□ 0.58
GFAP-237ENST00000640552 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
GFAP-237ENST00000640552 STK26Q9P289 416 aa18.68■□□□□ 0.58
GFAP-237ENST00000640552 MLECQ14165 292 aa18.67■□□□□ 0.58
GFAP-237ENST00000640552 ARHGEF5Q12774 1597 aa18.66■□□□□ 0.58
GFAP-237ENST00000640552 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
GFAP-237ENST00000640552 ADGRF5Q8IZF2 1346 aa18.65■□□□□ 0.58
GFAP-237ENST00000640552 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
GFAP-237ENST00000640552 KDM5CP41229 1560 aa18.64■□□□□ 0.57
GFAP-237ENST00000640552 ERBINQ96RT1 1412 aa18.64■□□□□ 0.57
GFAP-237ENST00000640552 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
GFAP-237ENST00000640552 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
GFAP-237ENST00000640552 RCAN3Q9UKA8 241 aa18.63■□□□□ 0.57
GFAP-237ENST00000640552 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
GFAP-237ENST00000640552 CFAP65Q6ZU64 1925 aaKnown RBP18.63■□□□□ 0.57
GFAP-237ENST00000640552 MYO5CQ9NQX4 1742 aa18.62■□□□□ 0.57
GFAP-237ENST00000640552 ASXL2Q76L83 1435 aa18.62■□□□□ 0.57
GFAP-237ENST00000640552 DUOX2Q9NRD8 1548 aa18.62■□□□□ 0.57
GFAP-237ENST00000640552 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
GFAP-237ENST00000640552 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
GFAP-237ENST00000640552 EXOC6Q8TAG9 804 aa18.61■□□□□ 0.57
GFAP-237ENST00000640552 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
GFAP-237ENST00000640552 BRD4O60885 1362 aaPredicted RBP18.6■□□□□ 0.57
GFAP-237ENST00000640552 WDR7Q9Y4E6 1490 aa18.59■□□□□ 0.57
GFAP-237ENST00000640552 PPP2R1AP30153 589 aa18.55■□□□□ 0.56
GFAP-237ENST00000640552 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
GFAP-237ENST00000640552 CD109Q6YHK3 1445 aa18.54■□□□□ 0.56
GFAP-237ENST00000640552 SLC12A5Q9H2X9 1139 aa18.53■□□□□ 0.56
GFAP-237ENST00000640552 SKAP1Q86WV1 359 aa18.53■□□□□ 0.56
GFAP-237ENST00000640552 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
GFAP-237ENST00000640552 UGGT1Q9NYU2 1555 aa18.52■□□□□ 0.56
GFAP-237ENST00000640552 SMG6Q86US8 1419 aaKnown RBP18.52■□□□□ 0.56
GFAP-237ENST00000640552 ANP32EQ9BTT0 268 aa18.52■□□□□ 0.56
GFAP-237ENST00000640552 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.56
GFAP-237ENST00000640552 APAF1O14727 1248 aa18.51■□□□□ 0.55
GFAP-237ENST00000640552 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
GFAP-237ENST00000640552 ABCC1P33527 1531 aa18.5■□□□□ 0.55
GFAP-237ENST00000640552 ERICH6BQ5W0A0 696 aa18.5■□□□□ 0.55
GFAP-237ENST00000640552 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
GFAP-237ENST00000640552 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
GFAP-237ENST00000640552 SRPK2P78362 688 aaKnown RBP18.48■□□□□ 0.55
GFAP-237ENST00000640552 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
GFAP-237ENST00000640552 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
GFAP-237ENST00000640552 EIF3AQ14152 1382 aaKnown RBP18.48■□□□□ 0.55
GFAP-237ENST00000640552 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
GFAP-237ENST00000640552 CENPJQ9HC77 1338 aaPredicted RBP18.47■□□□□ 0.55
GFAP-237ENST00000640552 ATP10AO60312 1499 aa18.46■□□□□ 0.55
GFAP-237ENST00000640552 PPM1GO15355 546 aaPredicted RBP18.46■□□□□ 0.55
GFAP-237ENST00000640552 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
GFAP-237ENST00000640552 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
GFAP-237ENST00000640552 POGKQ9P215 609 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms