RNA–Protein interactions for RNA: ENST00000640523.1

KCNMA1-283, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-283ENST00000640523 CCDC34Q96HJ3 373 aa28.52■■■□□ 2.16
KCNMA1-283ENST00000640523 CHMP5Q9NZZ3 219 aa28.52■■■□□ 2.16
KCNMA1-283ENST00000640523 E9PSI1 815 aa28.49■■■□□ 2.15
KCNMA1-283ENST00000640523 FOXD4L5Q5VV16 416 aaPredicted RBP28.48■■■□□ 2.15
KCNMA1-283ENST00000640523 FOXD4L4Q8WXT5 416 aaPredicted RBP28.48■■■□□ 2.15
KCNMA1-283ENST00000640523 GPATCH3Q96I76 525 aa28.48■■■□□ 2.15
KCNMA1-283ENST00000640523 GGT6Q6P531 493 aa28.48■■■□□ 2.15
KCNMA1-283ENST00000640523 KIF16BQ96L93 1317 aa28.47■■■□□ 2.15
KCNMA1-283ENST00000640523 ST20-MTHFSA0A0A6YYL1 179 aa28.47■■■□□ 2.15
KCNMA1-283ENST00000640523 NFKBIBQ15653 356 aa28.47■■■□□ 2.15
KCNMA1-283ENST00000640523 HDAC5Q9UQL6 1122 aa28.47■■■□□ 2.15
KCNMA1-283ENST00000640523 ISY1Q9ULR0 285 aaKnown RBP28.46■■■□□ 2.15
KCNMA1-283ENST00000640523 ATP6V1DQ9Y5K8 247 aa28.46■■■□□ 2.15
KCNMA1-283ENST00000640523 FAM43AQ8N2R8 423 aa28.45■■■□□ 2.15
KCNMA1-283ENST00000640523 CLSTN1O94985 981 aa28.45■■■□□ 2.15
KCNMA1-283ENST00000640523 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.45■■■□□ 2.14
KCNMA1-283ENST00000640523 FAM13BQ9NYF5 915 aa28.44■■■□□ 2.14
KCNMA1-283ENST00000640523 ZKSCAN2Q63HK3 967 aa28.44■■■□□ 2.14
KCNMA1-283ENST00000640523 HSP90B1P14625 803 aaKnown RBP28.43■■■□□ 2.14
KCNMA1-283ENST00000640523 NOC3LQ8WTT2 800 aaKnown RBP28.43■■■□□ 2.14
KCNMA1-283ENST00000640523 COG6Q9Y2V7 657 aa28.43■■■□□ 2.14
KCNMA1-283ENST00000640523 SPAG9O60271 1321 aaKnown RBP28.43■■■□□ 2.14
KCNMA1-283ENST00000640523 PANK3Q9H999 370 aa28.42■■■□□ 2.14
KCNMA1-283ENST00000640523 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
KCNMA1-283ENST00000640523 LMOD3Q0VAK6 560 aa28.41■■■□□ 2.14
KCNMA1-283ENST00000640523 KIF3AQ9Y496 699 aa28.41■■■□□ 2.14
KCNMA1-283ENST00000640523 ANKRD45Q5TZF3 282 aa28.4■■■□□ 2.14
KCNMA1-283ENST00000640523 SLC4A10Q6U841 1118 aa28.39■■■□□ 2.14
KCNMA1-283ENST00000640523 TERF2IPQ9NYB0 399 aa28.39■■■□□ 2.14
KCNMA1-283ENST00000640523 MROH2BQ7Z745 1585 aa28.38■■■□□ 2.13
KCNMA1-283ENST00000640523 ZNF771Q7L3S4 317 aaPredicted RBP28.38■■■□□ 2.13
KCNMA1-283ENST00000640523 BCL2L13Q9BXK5 485 aa28.37■■■□□ 2.13
KCNMA1-283ENST00000640523 RRP7AQ9Y3A4 280 aaKnown RBP28.36■■■□□ 2.13
KCNMA1-283ENST00000640523 GOLGA6L19H0YKK7 550 aa28.36■■■□□ 2.13
KCNMA1-283ENST00000640523 TPM3P06753 285 aa28.35■■■□□ 2.13
KCNMA1-283ENST00000640523 PAK3O75914 559 aaPredicted RBP28.35■■■□□ 2.13
KCNMA1-283ENST00000640523 ZNF330Q9Y3S2 320 aaPredicted RBP28.34■■■□□ 2.13
KCNMA1-283ENST00000640523 NGEFQ8N5V2 710 aa28.33■■■□□ 2.13
KCNMA1-283ENST00000640523 SF3A1Q15459 793 aaKnown RBP28.33■■■□□ 2.13
KCNMA1-283ENST00000640523 MRE11P49959 708 aa28.33■■■□□ 2.12
KCNMA1-283ENST00000640523 BECN2A8MW95 431 aa28.32■■■□□ 2.12
KCNMA1-283ENST00000640523 USP47Q96K76 1375 aa28.32■■■□□ 2.12
KCNMA1-283ENST00000640523 NCBP3Q53F19 620 aaKnown RBP28.32■■■□□ 2.12
KCNMA1-283ENST00000640523 REC8O95072 547 aa28.29■■■□□ 2.12
KCNMA1-283ENST00000640523 DDX19BQ9UMR2 479 aa28.29■■■□□ 2.12
KCNMA1-283ENST00000640523 GPS2Q13227 327 aa28.28■■■□□ 2.12
KCNMA1-283ENST00000640523 APAF1O14727 1248 aa28.28■■■□□ 2.12
KCNMA1-283ENST00000640523 FOXD4L6Q3SYB3 417 aaPredicted RBP28.28■■■□□ 2.12
KCNMA1-283ENST00000640523 FOXD4L3Q6VB84 417 aaPredicted RBP28.28■■■□□ 2.12
KCNMA1-283ENST00000640523 RAPGEF2Q9Y4G8 1499 aa28.28■■■□□ 2.12
KCNMA1-283ENST00000640523 MAP7D2Q96T17 732 aa28.27■■■□□ 2.12
KCNMA1-283ENST00000640523 NUCB2P80303 420 aa28.26■■■□□ 2.11
KCNMA1-283ENST00000640523 GORABQ5T7V8 394 aa28.26■■■□□ 2.11
KCNMA1-283ENST00000640523 CSB-PGBD3P0DP91 1061 aa28.25■■■□□ 2.11
KCNMA1-283ENST00000640523 RILPL2Q969X0 211 aa28.25■■■□□ 2.11
KCNMA1-283ENST00000640523 H3BQV1 296 aa28.24■■■□□ 2.11
KCNMA1-283ENST00000640523 IFFO2Q5TF58 517 aa28.24■■■□□ 2.11
KCNMA1-283ENST00000640523 MTERF4Q7Z6M4 381 aaKnown RBP28.24■■■□□ 2.11
KCNMA1-283ENST00000640523 FHOD3Q2V2M9 1422 aa28.24■■■□□ 2.11
KCNMA1-283ENST00000640523 SETQ01105 290 aaPredicted RBP28.24■■■□□ 2.11
KCNMA1-283ENST00000640523 A0A0U1RQG5 324 aaPredicted RBP28.23■■■□□ 2.11
KCNMA1-283ENST00000640523 EFCAB2Q5VUJ9 269 aa28.23■■■□□ 2.11
KCNMA1-283ENST00000640523 ZNF592Q92610 1267 aa28.23■■■□□ 2.11
KCNMA1-283ENST00000640523 RSPH4AQ5TD94 716 aa28.22■■■□□ 2.11
KCNMA1-283ENST00000640523 CARMIL2Q6F5E8 1435 aa28.22■■■□□ 2.11
KCNMA1-283ENST00000640523 CHMP4CQ96CF2 233 aa28.22■■■□□ 2.11
KCNMA1-283ENST00000640523 C22orf23Q9BZE7 217 aa28.21■■■□□ 2.11
KCNMA1-283ENST00000640523 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
KCNMA1-283ENST00000640523 CCDC18Q5T9S5 1454 aa28.2■■■□□ 2.11
KCNMA1-283ENST00000640523 CCAR2Q8N163 923 aaKnown RBP28.2■■■□□ 2.11
KCNMA1-283ENST00000640523 DZIP1LQ8IYY4 767 aaKnown RBP28.2■■■□□ 2.1
KCNMA1-283ENST00000640523 BRPF3Q9ULD4 1205 aa28.2■■■□□ 2.1
KCNMA1-283ENST00000640523 AAMPQ13685 434 aa28.2■■■□□ 2.1
KCNMA1-283ENST00000640523 FAM184AQ8NB25 1140 aa28.2■■■□□ 2.1
KCNMA1-283ENST00000640523 CCDC7Q96M83 1385 aa28.19■■■□□ 2.1
KCNMA1-283ENST00000640523 CHMP3Q9Y3E7 222 aa28.19■■■□□ 2.1
KCNMA1-283ENST00000640523 TEX35Q5T0J7 233 aa28.18■■■□□ 2.1
KCNMA1-283ENST00000640523 CREBRFQ8IUR6 639 aa28.18■■■□□ 2.1
KCNMA1-283ENST00000640523 ELL2O00472 640 aaPredicted RBP28.17■■■□□ 2.1
KCNMA1-283ENST00000640523 ANO8Q9HCE9 1232 aaPredicted RBP28.17■■■□□ 2.1
KCNMA1-283ENST00000640523 CCDC144AA2RUR9 1427 aa28.16■■■□□ 2.1
KCNMA1-283ENST00000640523 RASSF8Q8NHQ8 419 aa28.16■■■□□ 2.1
KCNMA1-283ENST00000640523 IL27Q8NEV9 243 aa28.16■■■□□ 2.1
KCNMA1-283ENST00000640523 NASPP49321 788 aaPredicted RBP28.16■■■□□ 2.1
KCNMA1-283ENST00000640523 CNTLNQ9NXG0 1405 aa28.15■■■□□ 2.1
KCNMA1-283ENST00000640523 TPM2P07951 284 aa28.15■■■□□ 2.1
KCNMA1-283ENST00000640523 R3HCC1Q9Y3T6 440 aaKnown RBP28.15■■■□□ 2.1
KCNMA1-283ENST00000640523 HNRNPMP52272 730 aaKnown RBP eCLIP28.14■■■□□ 2.1
KCNMA1-283ENST00000640523 TRAK2O60296 914 aa28.12■■■□□ 2.09
KCNMA1-283ENST00000640523 MCTP1Q6DN14 999 aa28.12■■■□□ 2.09
KCNMA1-283ENST00000640523 KIF7Q2M1P5 1343 aa28.12■■■□□ 2.09
KCNMA1-283ENST00000640523 DIAPH3Q9NSV4 1193 aa28.12■■■□□ 2.09
KCNMA1-283ENST00000640523 TSR1Q2NL82 804 aaKnown RBP28.11■■■□□ 2.09
KCNMA1-283ENST00000640523 KIF3BO15066 747 aa28.11■■■□□ 2.09
KCNMA1-283ENST00000640523 CCDC39Q9UFE4 941 aa28.11■■■□□ 2.09
KCNMA1-283ENST00000640523 FRAT2O75474 233 aaPredicted RBP28.1■■■□□ 2.09
KCNMA1-283ENST00000640523 TPM1P09493 284 aa28.1■■■□□ 2.09
KCNMA1-283ENST00000640523 TAF7LQ5H9L4 462 aa28.1■■■□□ 2.09
KCNMA1-283ENST00000640523 RUFY2Q8WXA3 655 aa28.09■■■□□ 2.09
KCNMA1-283ENST00000640523 TRAK1Q9UPV9 953 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 561.3 ms