RNA–Protein interactions for RNA: ENST00000640227.1

CNTN2-229, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 2,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-229ENST00000640227 ARHGEF12Q9NZN5 1544 aa16.17■□□□□ 0.18
CNTN2-229ENST00000640227 LRPPRCP42704 1394 aaKnown RBP16.17■□□□□ 0.18
CNTN2-229ENST00000640227 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
CNTN2-229ENST00000640227 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
CNTN2-229ENST00000640227 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
CNTN2-229ENST00000640227 RALBP1Q15311 655 aa16.15■□□□□ 0.18
CNTN2-229ENST00000640227 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
CNTN2-229ENST00000640227 NBPF1Q3BBV0 1214 aa16.13■□□□□ 0.17
CNTN2-229ENST00000640227 DEKP35659 375 aaKnown RBP16.13■□□□□ 0.17
CNTN2-229ENST00000640227 RRP1P56182 461 aaKnown RBP16.13■□□□□ 0.17
CNTN2-229ENST00000640227 ABCA8O94911 1581 aa16.13■□□□□ 0.17
CNTN2-229ENST00000640227 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
CNTN2-229ENST00000640227 ANP32AP39687 249 aaKnown RBP16.12■□□□□ 0.17
CNTN2-229ENST00000640227 NUP160Q12769 1436 aa16.11■□□□□ 0.17
CNTN2-229ENST00000640227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
CNTN2-229ENST00000640227 PTPRGP23470 1445 aa16.11■□□□□ 0.17
CNTN2-229ENST00000640227 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
CNTN2-229ENST00000640227 E9PCH4 1651 aa16.1■□□□□ 0.17
CNTN2-229ENST00000640227 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
CNTN2-229ENST00000640227 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
CNTN2-229ENST00000640227 IPO9Q96P70 1041 aaKnown RBP16.09■□□□□ 0.17
CNTN2-229ENST00000640227 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
CNTN2-229ENST00000640227 KTN1Q86UP2 1357 aaKnown RBP16.09■□□□□ 0.17
CNTN2-229ENST00000640227 NLRP13Q86W25 1043 aa16.09■□□□□ 0.17
CNTN2-229ENST00000640227 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.16
CNTN2-229ENST00000640227 PRAG1Q86YV5 1406 aa16.08■□□□□ 0.16
CNTN2-229ENST00000640227 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
CNTN2-229ENST00000640227 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
CNTN2-229ENST00000640227 PER1O15534 1290 aaPredicted RBP16.06■□□□□ 0.16
CNTN2-229ENST00000640227 ZBTB47Q9UFB7 747 aaPredicted RBP16.06■□□□□ 0.16
CNTN2-229ENST00000640227 CHD1O14646 1710 aa16.05■□□□□ 0.16
CNTN2-229ENST00000640227 SAMD9LQ8IVG5 1584 aa16.05■□□□□ 0.16
CNTN2-229ENST00000640227 TRPM1Q7Z4N2 1603 aa16.05■□□□□ 0.16
CNTN2-229ENST00000640227 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
CNTN2-229ENST00000640227 ARHGEF5Q12774 1597 aa16.05■□□□□ 0.16
CNTN2-229ENST00000640227 PLIN1O60240 522 aa16.04■□□□□ 0.16
CNTN2-229ENST00000640227 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
CNTN2-229ENST00000640227 DISP3Q9P2K9 1392 aa16.04■□□□□ 0.16
CNTN2-229ENST00000640227 PANK3Q9H999 370 aa16.02■□□□□ 0.16
CNTN2-229ENST00000640227 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.16
CNTN2-229ENST00000640227 PLA2R1Q13018 1463 aa16.02■□□□□ 0.16
CNTN2-229ENST00000640227 A2MP01023 1474 aa16.02■□□□□ 0.15
CNTN2-229ENST00000640227 SKAP1Q86WV1 359 aa16.01■□□□□ 0.15
CNTN2-229ENST00000640227 TESK2Q96S53 571 aa16.01■□□□□ 0.15
CNTN2-229ENST00000640227 SYCP2Q9BX26 1530 aa16■□□□□ 0.15
CNTN2-229ENST00000640227 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
CNTN2-229ENST00000640227 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
CNTN2-229ENST00000640227 COL17A1Q9UMD9 1497 aaPredicted RBP15.98■□□□□ 0.15
CNTN2-229ENST00000640227 PREX2Q70Z35 1606 aa15.98■□□□□ 0.15
CNTN2-229ENST00000640227 PDE4AP27815 886 aa15.98■□□□□ 0.15
CNTN2-229ENST00000640227 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
CNTN2-229ENST00000640227 GPRASP1Q5JY77 1395 aa15.97■□□□□ 0.15
CNTN2-229ENST00000640227 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
CNTN2-229ENST00000640227 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.15
CNTN2-229ENST00000640227 ERBINQ96RT1 1412 aa15.96■□□□□ 0.15
CNTN2-229ENST00000640227 CRBNQ96SW2 442 aa15.96■□□□□ 0.15
CNTN2-229ENST00000640227 RSPH4AQ5TD94 716 aa15.95■□□□□ 0.14
CNTN2-229ENST00000640227 PRDM15P57071 1507 aaPredicted RBP15.95■□□□□ 0.14
CNTN2-229ENST00000640227 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
CNTN2-229ENST00000640227 TMF1P82094 1093 aa15.94■□□□□ 0.14
CNTN2-229ENST00000640227 TTC37Q6PGP7 1564 aa15.94■□□□□ 0.14
CNTN2-229ENST00000640227 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
CNTN2-229ENST00000640227 UNC13BO14795 1591 aa15.93■□□□□ 0.14
CNTN2-229ENST00000640227 BACH2Q9BYV9 841 aa15.93■□□□□ 0.14
CNTN2-229ENST00000640227 BLMP54132 1417 aaPredicted RBP15.93■□□□□ 0.14
CNTN2-229ENST00000640227 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
CNTN2-229ENST00000640227 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
CNTN2-229ENST00000640227 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
CNTN2-229ENST00000640227 WASHC2CQ9Y4E1 1318 aa15.91■□□□□ 0.14
CNTN2-229ENST00000640227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.9■□□□□ 0.14
CNTN2-229ENST00000640227 LAMC1P11047 1609 aa15.88■□□□□ 0.13
CNTN2-229ENST00000640227 IQGAP3Q86VI3 1631 aa15.88■□□□□ 0.13
CNTN2-229ENST00000640227 MS4A1P11836 297 aa15.88■□□□□ 0.13
CNTN2-229ENST00000640227 MAST1Q9Y2H9 1570 aa15.87■□□□□ 0.13
CNTN2-229ENST00000640227 MAGI2Q86UL8 1455 aa15.87■□□□□ 0.13
CNTN2-229ENST00000640227 ZMYM4Q5VZL5 1548 aa15.87■□□□□ 0.13
CNTN2-229ENST00000640227 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
CNTN2-229ENST00000640227 PPP2R1AP30153 589 aa15.86■□□□□ 0.13
CNTN2-229ENST00000640227 KNSTRNQ9Y448 316 aa15.86■□□□□ 0.13
CNTN2-229ENST00000640227 PLEKHH1Q9ULM0 1364 aa15.85■□□□□ 0.13
CNTN2-229ENST00000640227 WDR43Q15061 677 aaKnown RBP eCLIP15.85■□□□□ 0.13
CNTN2-229ENST00000640227 PLXNC1O60486 1568 aa15.84■□□□□ 0.13
CNTN2-229ENST00000640227 WDR7Q9Y4E6 1490 aa15.84■□□□□ 0.13
CNTN2-229ENST00000640227 NEFMP07197 916 aa15.83■□□□□ 0.13
CNTN2-229ENST00000640227 DUOX2Q9NRD8 1548 aa15.83■□□□□ 0.12
CNTN2-229ENST00000640227 INSRP06213 1382 aa15.82■□□□□ 0.12
CNTN2-229ENST00000640227 DUSP27Q5VZP5 1158 aa15.82■□□□□ 0.12
CNTN2-229ENST00000640227 AMER1Q5JTC6 1135 aaPredicted RBP15.81■□□□□ 0.12
CNTN2-229ENST00000640227 CCDC146Q8IYE0 955 aa15.81■□□□□ 0.12
CNTN2-229ENST00000640227 RNF17Q9BXT8 1623 aaKnown RBP15.81■□□□□ 0.12
CNTN2-229ENST00000640227 ATP10AO60312 1499 aa15.81■□□□□ 0.12
CNTN2-229ENST00000640227 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
CNTN2-229ENST00000640227 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
CNTN2-229ENST00000640227 KDM2BQ8NHM5 1336 aa15.78■□□□□ 0.12
CNTN2-229ENST00000640227 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
CNTN2-229ENST00000640227 MADDQ8WXG6 1647 aa15.77■□□□□ 0.12
CNTN2-229ENST00000640227 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.11
CNTN2-229ENST00000640227 AFAP1Q8N556 730 aa15.76■□□□□ 0.11
CNTN2-229ENST00000640227 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
CNTN2-229ENST00000640227 IQGAP1P46940 1657 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms