RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 CCDC144AA2RUR9 1427 aa12.47□□□□□ -0.41
NECAP1-217ENST00000639276 ABCA9Q8IUA7 1624 aa12.47□□□□□ -0.41
NECAP1-217ENST00000639276 ERBINQ96RT1 1412 aa12.46□□□□□ -0.41
NECAP1-217ENST00000639276 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.41
NECAP1-217ENST00000639276 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.42
NECAP1-217ENST00000639276 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
NECAP1-217ENST00000639276 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
NECAP1-217ENST00000639276 ADGRL1O94910 1474 aa12.45□□□□□ -0.42
NECAP1-217ENST00000639276 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
NECAP1-217ENST00000639276 ZFYVE16Q7Z3T8 1539 aa12.45□□□□□ -0.42
NECAP1-217ENST00000639276 ARAP3Q8WWN8 1544 aa12.45□□□□□ -0.42
NECAP1-217ENST00000639276 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
NECAP1-217ENST00000639276 CCDC184Q52MB2 194 aa12.44□□□□□ -0.42
NECAP1-217ENST00000639276 BCORL1Q5H9F3 1711 aa12.44□□□□□ -0.42
NECAP1-217ENST00000639276 NBPF1Q3BBV0 1214 aa12.43□□□□□ -0.42
NECAP1-217ENST00000639276 RTEL1-TNFRSF6BF6WH68 1400 aa12.42□□□□□ -0.42
NECAP1-217ENST00000639276 ST20-MTHFSA0A0A6YYL1 179 aa12.42□□□□□ -0.42
NECAP1-217ENST00000639276 KIF3BO15066 747 aa12.42□□□□□ -0.42
NECAP1-217ENST00000639276 MAGI2Q86UL8 1455 aa12.42□□□□□ -0.42
NECAP1-217ENST00000639276 KDM5CP41229 1560 aa12.42□□□□□ -0.42
NECAP1-217ENST00000639276 RALGAPBQ86X10 1494 aa12.42□□□□□ -0.42
NECAP1-217ENST00000639276 ATP7AQ04656 1500 aa12.41□□□□□ -0.42
NECAP1-217ENST00000639276 A2MP01023 1474 aa12.4□□□□□ -0.42
NECAP1-217ENST00000639276 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
NECAP1-217ENST00000639276 PRKRIP1Q9H875 184 aaPredicted RBP12.4□□□□□ -0.43
NECAP1-217ENST00000639276 CD109Q6YHK3 1445 aa12.39□□□□□ -0.43
NECAP1-217ENST00000639276 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
NECAP1-217ENST00000639276 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
NECAP1-217ENST00000639276 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-217ENST00000639276 E9PCH4 1651 aa12.37□□□□□ -0.43
NECAP1-217ENST00000639276 POLR1AO95602 1720 aaPredicted RBP12.37□□□□□ -0.43
NECAP1-217ENST00000639276 DHX29Q7Z478 1369 aaKnown RBP12.36□□□□□ -0.43
NECAP1-217ENST00000639276 ATP10AO60312 1499 aa12.36□□□□□ -0.43
NECAP1-217ENST00000639276 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
NECAP1-217ENST00000639276 KIDINS220Q9ULH0 1771 aa12.35□□□□□ -0.43
NECAP1-217ENST00000639276 TRPM1Q7Z4N2 1603 aa12.34□□□□□ -0.43
NECAP1-217ENST00000639276 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
NECAP1-217ENST00000639276 DEPDC5O75140 1603 aa12.33□□□□□ -0.44
NECAP1-217ENST00000639276 FAM9BQ8IZU0 186 aa12.33□□□□□ -0.44
NECAP1-217ENST00000639276 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
NECAP1-217ENST00000639276 SUPT16HQ9Y5B9 1047 aaKnown RBP12.33□□□□□ -0.44
NECAP1-217ENST00000639276 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
NECAP1-217ENST00000639276 KANK1Q14678 1352 aa12.32□□□□□ -0.44
NECAP1-217ENST00000639276 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
NECAP1-217ENST00000639276 GGT6Q6P531 493 aa12.31□□□□□ -0.44
NECAP1-217ENST00000639276 PTPRTO14522 1441 aa12.3□□□□□ -0.44
NECAP1-217ENST00000639276 POGZQ7Z3K3 1410 aa12.3□□□□□ -0.44
NECAP1-217ENST00000639276 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
NECAP1-217ENST00000639276 CLTCL1P53675 1640 aa12.3□□□□□ -0.44
NECAP1-217ENST00000639276 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
NECAP1-217ENST00000639276 SPHKAPQ2M3C7 1700 aa12.3□□□□□ -0.44
NECAP1-217ENST00000639276 TET3O43151 1660 aa12.29□□□□□ -0.44
NECAP1-217ENST00000639276 TRPM2O94759 1503 aa12.29□□□□□ -0.44
NECAP1-217ENST00000639276 ARID4BQ4LE39 1312 aaPredicted RBP12.29□□□□□ -0.44
NECAP1-217ENST00000639276 GPRASP1Q5JY77 1395 aa12.29□□□□□ -0.44
NECAP1-217ENST00000639276 TESK2Q96S53 571 aa12.28□□□□□ -0.44
NECAP1-217ENST00000639276 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-217ENST00000639276 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
NECAP1-217ENST00000639276 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
NECAP1-217ENST00000639276 DISP3Q9P2K9 1392 aa12.27□□□□□ -0.45
NECAP1-217ENST00000639276 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.45
NECAP1-217ENST00000639276 EIF2AK4Q9P2K8 1649 aaKnown RBP12.26□□□□□ -0.45
NECAP1-217ENST00000639276 MLH3Q9UHC1 1453 aa12.26□□□□□ -0.45
NECAP1-217ENST00000639276 BCANQ96GW7 911 aa12.25□□□□□ -0.45
NECAP1-217ENST00000639276 CEP152O94986 1710 aa12.25□□□□□ -0.45
NECAP1-217ENST00000639276 MYT1Q01538 1121 aa12.25□□□□□ -0.45
NECAP1-217ENST00000639276 FKBP8Q14318 412 aa12.25□□□□□ -0.45
NECAP1-217ENST00000639276 PPRC1Q5VV67 1664 aaKnown RBP12.25□□□□□ -0.45
NECAP1-217ENST00000639276 RIMBP3CA6NJZ7 1639 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 RIMBP3BA6NNM3 1639 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 RIMBP3Q9UFD9 1639 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 CFAP74Q9C0B2 1584 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
NECAP1-217ENST00000639276 FAM69CQ0P6D2 419 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 MADDQ8WXG6 1647 aa12.24□□□□□ -0.45
NECAP1-217ENST00000639276 ADGRF5Q8IZF2 1346 aa12.23□□□□□ -0.45
NECAP1-217ENST00000639276 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
NECAP1-217ENST00000639276 EFCAB6Q5THR3 1501 aa12.23□□□□□ -0.45
NECAP1-217ENST00000639276 CFAP70Q5T0N1 1121 aa12.23□□□□□ -0.45
NECAP1-217ENST00000639276 NEO1Q92859 1461 aa12.22□□□□□ -0.45
NECAP1-217ENST00000639276 NPATQ14207 1427 aa12.21□□□□□ -0.45
NECAP1-217ENST00000639276 YEATS2Q9ULM3 1422 aa12.21□□□□□ -0.45
NECAP1-217ENST00000639276 LAMC1P11047 1609 aa12.21□□□□□ -0.46
NECAP1-217ENST00000639276 PER1O15534 1290 aaPredicted RBP12.21□□□□□ -0.46
NECAP1-217ENST00000639276 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.46
NECAP1-217ENST00000639276 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
NECAP1-217ENST00000639276 PANK3Q9H999 370 aa12.2□□□□□ -0.46
NECAP1-217ENST00000639276 MAP3K4Q9Y6R4 1608 aa12.2□□□□□ -0.46
NECAP1-217ENST00000639276 TMF1P82094 1093 aa12.2□□□□□ -0.46
NECAP1-217ENST00000639276 MROH2AA6NES4 1674 aa12.19□□□□□ -0.46
NECAP1-217ENST00000639276 LMTK2Q8IWU2 1503 aa12.19□□□□□ -0.46
NECAP1-217ENST00000639276 CC2D1BQ5T0F9 858 aaKnown RBP12.19□□□□□ -0.46
NECAP1-217ENST00000639276 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-217ENST00000639276 TMC1Q8TDI8 760 aa12.19□□□□□ -0.46
NECAP1-217ENST00000639276 RICTORQ6R327 1708 aa12.18□□□□□ -0.46
NECAP1-217ENST00000639276 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
NECAP1-217ENST00000639276 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-217ENST00000639276 SENP3Q9H4L4 574 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms