RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	POTEC	B2RU33	542 aa		5.5	□□□□□ -1.53
LMBR1-222	ENST00000638959	PPP1R18	Q6NYC8	613 aa		5.5	□□□□□ -1.53
LMBR1-222	ENST00000638959	STK17A	Q9UEE5	414 aa		5.5	□□□□□ -1.53
LMBR1-222	ENST00000638959	TSR3	Q9UJK0	312 aa	Known RBP	5.5	□□□□□ -1.53
LMBR1-222	ENST00000638959	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	5.49	□□□□□ -1.53
LMBR1-222	ENST00000638959	PKDCC	Q504Y2	493 aa		5.48	□□□□□ -1.53
LMBR1-222	ENST00000638959	LCE2A	Q5TA79	106 aa	Predicted RBP	5.48	□□□□□ -1.53
LMBR1-222	ENST00000638959	LRCH3	Q96II8	777 aa		5.48	□□□□□ -1.53
LMBR1-222	ENST00000638959	SEPT9	Q9UHD8	586 aa	Predicted RBP	5.48	□□□□□ -1.53
LMBR1-222	ENST00000638959	KIAA1468	Q9P260	1216 aa		5.47	□□□□□ -1.53
LMBR1-222	ENST00000638959	COL9A1	P20849	921 aa		5.46	□□□□□ -1.54
LMBR1-222	ENST00000638959	MYT1	Q01538	1121 aa		5.46	□□□□□ -1.54
LMBR1-222	ENST00000638959	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	5.46	□□□□□ -1.54
LMBR1-222	ENST00000638959	TJAP1	Q5JTD0	557 aa		5.45	□□□□□ -1.54
LMBR1-222	ENST00000638959	EVI5	O60447	810 aa		5.44	□□□□□ -1.54
LMBR1-222	ENST00000638959	FAM98C	Q17RN3	349 aa	Known RBP	5.44	□□□□□ -1.54
LMBR1-222	ENST00000638959	MTR	Q99707	1265 aa		5.43	□□□□□ -1.54
LMBR1-222	ENST00000638959	ANO8	Q9HCE9	1232 aa	Predicted RBP	5.43	□□□□□ -1.54
LMBR1-222	ENST00000638959	DGAT1	O75907	488 aa		5.42	□□□□□ -1.54
LMBR1-222	ENST00000638959	WFS1	O76024	890 aa		5.42	□□□□□ -1.54
LMBR1-222	ENST00000638959	PPP4C	P60510	307 aa		5.42	□□□□□ -1.54
LMBR1-222	ENST00000638959	INSM1	Q01101	510 aa	Predicted RBP	5.42	□□□□□ -1.54
LMBR1-222	ENST00000638959	IL21	Q9HBE4	155 aa		5.42	□□□□□ -1.54
LMBR1-222	ENST00000638959	GGCX	P38435	758 aa		5.4	□□□□□ -1.54
LMBR1-222	ENST00000638959	PPP1R15B	Q5SWA1	713 aa		5.4	□□□□□ -1.54
LMBR1-222	ENST00000638959	FAM187A	A6NFU0	413 aa		5.39	□□□□□ -1.55
LMBR1-222	ENST00000638959	ONECUT3	O60422	494 aa	Predicted RBP	5.39	□□□□□ -1.55
LMBR1-222	ENST00000638959	TRIM67	Q6ZTA4	783 aa		5.39	□□□□□ -1.55
LMBR1-222	ENST00000638959	ZNF516	Q92618	1163 aa		5.39	□□□□□ -1.55
LMBR1-222	ENST00000638959	PCDHGA10	Q9Y5H3	936 aa		5.39	□□□□□ -1.55
LMBR1-222	ENST00000638959	TRIM6-TRIM34	B2RNG4	842 aa		5.37	□□□□□ -1.55
LMBR1-222	ENST00000638959	ST8SIA5	O15466	376 aa		5.37	□□□□□ -1.55
LMBR1-222	ENST00000638959	WIPF1	O43516	503 aa		5.36	□□□□□ -1.55
LMBR1-222	ENST00000638959	TYW1B	Q6NUM6	668 aa		5.36	□□□□□ -1.55
LMBR1-222	ENST00000638959	NKX2-3	Q8TAU0	364 aa		5.36	□□□□□ -1.55
LMBR1-222	ENST00000638959	FBXW7	Q969H0	707 aa		5.36	□□□□□ -1.55
LMBR1-222	ENST00000638959	MAP3K9	P80192	1104 aa		5.35	□□□□□ -1.55
LMBR1-222	ENST00000638959	SLC19A1	P41440	591 aa		5.34	□□□□□ -1.55
LMBR1-222	ENST00000638959	PRR20E	P86478	221 aa		5.34	□□□□□ -1.55
LMBR1-222	ENST00000638959	PRR20C	P86479	221 aa		5.34	□□□□□ -1.55
LMBR1-222	ENST00000638959	PRR20D	P86480	221 aa		5.34	□□□□□ -1.55
LMBR1-222	ENST00000638959	PRR20B	P86481	221 aa		5.34	□□□□□ -1.55
LMBR1-222	ENST00000638959	PRR20A	P86496	221 aa		5.34	□□□□□ -1.55
LMBR1-222	ENST00000638959	NFX1	Q12986	1120 aa	Known RBP	5.33	□□□□□ -1.56
LMBR1-222	ENST00000638959	SUZ12	Q15022	739 aa	Known RBP	5.33	□□□□□ -1.56
LMBR1-222	ENST00000638959	CRISPLD2	Q9H0B8	497 aa		5.33	□□□□□ -1.56
LMBR1-222	ENST00000638959	AAAS	Q9NRG9	546 aa		5.33	□□□□□ -1.56
LMBR1-222	ENST00000638959	TNFRSF10A	O00220	468 aa		5.32	□□□□□ -1.56
LMBR1-222	ENST00000638959	RNF40	O75150	1001 aa		5.32	□□□□□ -1.56
LMBR1-222	ENST00000638959	ECM2	O94769	699 aa	Predicted RBP	5.32	□□□□□ -1.56
LMBR1-222	ENST00000638959	SAMD7	Q7Z3H4	446 aa		5.32	□□□□□ -1.56
LMBR1-222	ENST00000638959	TMUB1	Q9BVT8	246 aa		5.32	□□□□□ -1.56
LMBR1-222	ENST00000638959	FAM181B	A6NEQ2	426 aa		5.31	□□□□□ -1.56
LMBR1-222	ENST00000638959	PHF14	O94880	888 aa		5.31	□□□□□ -1.56
LMBR1-222	ENST00000638959	C6orf132	Q5T0Z8	1188 aa		5.31	□□□□□ -1.56
LMBR1-222	ENST00000638959	COPS2	P61201	443 aa		5.3	□□□□□ -1.56
LMBR1-222	ENST00000638959	SPRYD7	Q5W111	196 aa		5.3	□□□□□ -1.56
LMBR1-222	ENST00000638959	ZNF598	Q86UK7	904 aa	Known RBP	5.3	□□□□□ -1.56
LMBR1-222	ENST00000638959	C11orf95	C9JLR9	678 aa	Predicted RBP	5.29	□□□□□ -1.56
LMBR1-222	ENST00000638959	ZNF697	Q5TEC3	545 aa		5.29	□□□□□ -1.56
LMBR1-222	ENST00000638959	PACS2	Q86VP3	889 aa		5.29	□□□□□ -1.56
LMBR1-222	ENST00000638959	RGL2	O15211	777 aa		5.28	□□□□□ -1.56
LMBR1-222	ENST00000638959	APLP1	P51693	650 aa		5.28	□□□□□ -1.56
LMBR1-222	ENST00000638959	GMPR2	Q9P2T1	348 aa	Known RBP	5.28	□□□□□ -1.56
LMBR1-222	ENST00000638959	RNF223	E7ERA6	249 aa		5.27	□□□□□ -1.57
LMBR1-222	ENST00000638959	SMAP	O00193	183 aa		5.27	□□□□□ -1.57
LMBR1-222	ENST00000638959	EMID1	Q96A84	441 aa	Predicted RBP	5.27	□□□□□ -1.57
LMBR1-222	ENST00000638959	RBM33	Q96EV2	1170 aa	Known RBP	5.27	□□□□□ -1.57
LMBR1-222	ENST00000638959	TSKS	Q9UJT2	592 aa		5.27	□□□□□ -1.57
LMBR1-222	ENST00000638959	GDF9	O60383	454 aa		5.26	□□□□□ -1.57
LMBR1-222	ENST00000638959	PDE4A	P27815	886 aa		5.26	□□□□□ -1.57
LMBR1-222	ENST00000638959	EPAS1	Q99814	870 aa		5.26	□□□□□ -1.57
LMBR1-222	ENST00000638959	DACH1	Q9UI36	760 aa		5.26	□□□□□ -1.57
LMBR1-222	ENST00000638959	NCKAP5L	Q9HCH0	1330 aa		5.25	□□□□□ -1.57
LMBR1-222	ENST00000638959	ZPR1	O75312	459 aa		5.24	□□□□□ -1.57
LMBR1-222	ENST00000638959	LCE2C	Q5TA81	110 aa		5.24	□□□□□ -1.57
LMBR1-222	ENST00000638959	DDX27	Q96GQ7	796 aa	Known RBP	5.24	□□□□□ -1.57
LMBR1-222	ENST00000638959	CRIPAK	Q8N1N5	446 aa		5.23	□□□□□ -1.57
LMBR1-222	ENST00000638959	TERT	O14746	1132 aa	Known RBP	5.22	□□□□□ -1.57
LMBR1-222	ENST00000638959	AXIN1	O15169	862 aa		5.22	□□□□□ -1.57
LMBR1-222	ENST00000638959	HDGF	P51858	240 aa	Known RBP	5.22	□□□□□ -1.57
LMBR1-222	ENST00000638959	LIAT1	Q6ZQX7	453 aa		5.22	□□□□□ -1.57
LMBR1-222	ENST00000638959	ANKLE1	Q8NAG6	615 aa		5.22	□□□□□ -1.57
LMBR1-222	ENST00000638959	LARP6	Q9BRS8	491 aa	Known RBP	5.22	□□□□□ -1.57
LMBR1-222	ENST00000638959	EMILIN3	Q9NT22	766 aa		5.22	□□□□□ -1.57
LMBR1-222	ENST00000638959	NECTIN2	Q92692	538 aa		5.21	□□□□□ -1.58
LMBR1-222	ENST00000638959	PPEF1	O14829	653 aa	Predicted RBP	5.2	□□□□□ -1.58
LMBR1-222	ENST00000638959	FOXC1	Q12948	553 aa		5.2	□□□□□ -1.58
LMBR1-222	ENST00000638959	PNMA3	Q9UL41	463 aa		5.2	□□□□□ -1.58
LMBR1-222	ENST00000638959	NBPF26	B4DH59	902 aa		5.19	□□□□□ -1.58
LMBR1-222	ENST00000638959	ZSCAN1	Q8NBB4	408 aa		5.19	□□□□□ -1.58
LMBR1-222	ENST00000638959	MAP3K7	O43318	606 aa		5.18	□□□□□ -1.58
LMBR1-222	ENST00000638959	TLL1	O43897	1013 aa		5.18	□□□□□ -1.58
LMBR1-222	ENST00000638959	TSR1	Q2NL82	804 aa	Known RBP	5.18	□□□□□ -1.58
LMBR1-222	ENST00000638959	CDCA7L	Q96GN5	454 aa		5.18	□□□□□ -1.58
LMBR1-222	ENST00000638959	S1PR4	O95977	384 aa		5.17	□□□□□ -1.58
LMBR1-222	ENST00000638959	AVP	P01185	164 aa		5.17	□□□□□ -1.58
LMBR1-222	ENST00000638959	CTC1	Q2NKJ3	1217 aa		5.17	□□□□□ -1.58
LMBR1-222	ENST00000638959	TATDN2	Q93075	761 aa		5.17	□□□□□ -1.58
LMBR1-222	ENST00000638959	PCDHB3	Q9Y5E6	796 aa		5.17	□□□□□ -1.58

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