RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 CSB-PGBD3P0DP91 1061 aa6.53□□□□□ -1.36
GABRA1-220ENST00000638159 NPHP4O75161 1426 aaPredicted RBP6.52□□□□□ -1.37
GABRA1-220ENST00000638159 APBA3O96018 575 aa6.52□□□□□ -1.37
GABRA1-220ENST00000638159 TARBP1Q13395 1621 aaKnown RBP6.52□□□□□ -1.37
GABRA1-220ENST00000638159 ADAMTS12P58397 1594 aa6.52□□□□□ -1.37
GABRA1-220ENST00000638159 CUX1P39880 1505 aa6.52□□□□□ -1.37
GABRA1-220ENST00000638159 KRT27Q7Z3Y8 459 aa6.52□□□□□ -1.37
GABRA1-220ENST00000638159 GRIN3BO60391 1043 aa6.51□□□□□ -1.37
GABRA1-220ENST00000638159 C11orf95C9JLR9 678 aaPredicted RBP6.51□□□□□ -1.37
GABRA1-220ENST00000638159 PAK3O75914 559 aaPredicted RBP6.51□□□□□ -1.37
GABRA1-220ENST00000638159 PAXIP1Q6ZW49 1069 aaPredicted RBP6.5□□□□□ -1.37
GABRA1-220ENST00000638159 COL17A1Q9UMD9 1497 aaPredicted RBP6.5□□□□□ -1.37
GABRA1-220ENST00000638159 GLI2P10070 1586 aa6.5□□□□□ -1.37
GABRA1-220ENST00000638159 ARHGAP5Q13017 1502 aa6.5□□□□□ -1.37
GABRA1-220ENST00000638159 ZBTB22O15209 634 aa6.5□□□□□ -1.37
GABRA1-220ENST00000638159 ZNF526Q8TF50 670 aaPredicted RBP6.5□□□□□ -1.37
GABRA1-220ENST00000638159 C1QTNF8P60827 252 aa6.5□□□□□ -1.37
GABRA1-220ENST00000638159 CPS1P31327 1500 aa6.5□□□□□ -1.37
GABRA1-220ENST00000638159 TMEM94Q12767 1356 aa6.49□□□□□ -1.37
GABRA1-220ENST00000638159 ABCA5Q8WWZ7 1642 aa6.49□□□□□ -1.37
GABRA1-220ENST00000638159 NPHP1O15259 732 aa6.49□□□□□ -1.37
GABRA1-220ENST00000638159 ESCO1Q5FWF5 840 aa6.49□□□□□ -1.37
GABRA1-220ENST00000638159 SHANK2Q9UPX8 1470 aa6.49□□□□□ -1.37
GABRA1-220ENST00000638159 LRPPRCP42704 1394 aaKnown RBP6.49□□□□□ -1.37
GABRA1-220ENST00000638159 IQGAP2Q13576 1575 aa6.49□□□□□ -1.37
GABRA1-220ENST00000638159 DEFB132Q7Z7B7 95 aa6.48□□□□□ -1.37
GABRA1-220ENST00000638159 PMFBP1Q8TBY8 1022 aa6.48□□□□□ -1.37
GABRA1-220ENST00000638159 ARAP3Q8WWN8 1544 aa6.48□□□□□ -1.37
GABRA1-220ENST00000638159 RIMS1Q86UR5 1692 aaKnown RBP6.48□□□□□ -1.37
GABRA1-220ENST00000638159 MED1Q15648 1581 aaPredicted RBP6.48□□□□□ -1.37
GABRA1-220ENST00000638159 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
GABRA1-220ENST00000638159 ZNF518AQ6AHZ1 1483 aa6.47□□□□□ -1.37
GABRA1-220ENST00000638159 KDM5BQ9UGL1 1544 aa6.47□□□□□ -1.37
GABRA1-220ENST00000638159 FBXO31Q5XUX0 539 aaPredicted RBP6.47□□□□□ -1.37
GABRA1-220ENST00000638159 PRDM11Q9NQV5 511 aa6.47□□□□□ -1.37
GABRA1-220ENST00000638159 POGKQ9P215 609 aa6.47□□□□□ -1.37
GABRA1-220ENST00000638159 USP35Q9P2H5 1018 aa6.47□□□□□ -1.37
GABRA1-220ENST00000638159 STRN4Q9NRL3 753 aa6.46□□□□□ -1.38
GABRA1-220ENST00000638159 NPHP3Q7Z494 1330 aa6.46□□□□□ -1.38
GABRA1-220ENST00000638159 FHOD3Q2V2M9 1422 aa6.46□□□□□ -1.38
GABRA1-220ENST00000638159 SEPT12Q8IYM1 358 aa6.45□□□□□ -1.38
GABRA1-220ENST00000638159 MADDQ8WXG6 1647 aa6.45□□□□□ -1.38
GABRA1-220ENST00000638159 LRRC9Q6ZRR7 1453 aa6.45□□□□□ -1.38
GABRA1-220ENST00000638159 NPATQ14207 1427 aa6.45□□□□□ -1.38
GABRA1-220ENST00000638159 CTTNBP2Q8WZ74 1663 aa6.45□□□□□ -1.38
GABRA1-220ENST00000638159 FAM50AQ14320 339 aaKnown RBP6.45□□□□□ -1.38
GABRA1-220ENST00000638159 FAM196AQ6ZSG2 479 aa6.45□□□□□ -1.38
GABRA1-220ENST00000638159 SETD1BQ9UPS6 1966 aaKnown RBP6.44□□□□□ -1.38
GABRA1-220ENST00000638159 NGDNQ8NEJ9 315 aaKnown RBP6.44□□□□□ -1.38
GABRA1-220ENST00000638159 NUTM2FA1L443 756 aa6.44□□□□□ -1.38
GABRA1-220ENST00000638159 EN1Q05925 392 aaPredicted RBP6.44□□□□□ -1.38
GABRA1-220ENST00000638159 FMN1Q68DA7 1419 aa6.43□□□□□ -1.38
GABRA1-220ENST00000638159 SLC52A1Q9NWF4 448 aa6.43□□□□□ -1.38
GABRA1-220ENST00000638159 KCNQ2O43526 872 aa6.43□□□□□ -1.38
GABRA1-220ENST00000638159 GJD4Q96KN9 370 aaPredicted RBP6.42□□□□□ -1.38
GABRA1-220ENST00000638159 WWC3Q9ULE0 1092 aa6.42□□□□□ -1.38
GABRA1-220ENST00000638159 PLEKHH2Q8IVE3 1493 aa6.42□□□□□ -1.38
GABRA1-220ENST00000638159 CUL7Q14999 1698 aa6.42□□□□□ -1.38
GABRA1-220ENST00000638159 LTBP4Q8N2S1 1624 aa6.42□□□□□ -1.38
GABRA1-220ENST00000638159 FAM135BQ49AJ0 1406 aa6.42□□□□□ -1.38
GABRA1-220ENST00000638159 ATF5Q9Y2D1 282 aaPredicted RBP6.42□□□□□ -1.38
GABRA1-220ENST00000638159 ADCY10Q96PN6 1610 aa6.42□□□□□ -1.38
GABRA1-220ENST00000638159 CAMSAP1Q5T5Y3 1602 aa6.41□□□□□ -1.38
GABRA1-220ENST00000638159 AATKQ6ZMQ8 1374 aa6.41□□□□□ -1.38
GABRA1-220ENST00000638159 PBRM1Q86U86 1689 aa6.41□□□□□ -1.38
GABRA1-220ENST00000638159 HRCP23327 699 aa6.4□□□□□ -1.38
GABRA1-220ENST00000638159 ITGAEP38570 1179 aa6.4□□□□□ -1.38
GABRA1-220ENST00000638159 LRRIQ1Q96JM4 1722 aa6.4□□□□□ -1.38
GABRA1-220ENST00000638159 APLP1P51693 650 aa6.4□□□□□ -1.38
GABRA1-220ENST00000638159 PCDH10Q9P2E7 1040 aa6.4□□□□□ -1.38
GABRA1-220ENST00000638159 GPRASP1Q5JY77 1395 aa6.4□□□□□ -1.38
GABRA1-220ENST00000638159 FYCO1Q9BQS8 1478 aa6.4□□□□□ -1.39
GABRA1-220ENST00000638159 FAM98CQ17RN3 349 aaKnown RBP6.4□□□□□ -1.39
GABRA1-220ENST00000638159 UNC5CLQ8IV45 518 aa6.4□□□□□ -1.39
GABRA1-220ENST00000638159 TMX4Q9H1E5 349 aaPredicted RBP6.39□□□□□ -1.39
GABRA1-220ENST00000638159 RPRD2Q5VT52 1461 aaKnown RBP6.39□□□□□ -1.39
GABRA1-220ENST00000638159 AMOTL2Q9Y2J4 779 aa6.39□□□□□ -1.39
GABRA1-220ENST00000638159 PLCH2O75038 1416 aa6.39□□□□□ -1.39
GABRA1-220ENST00000638159 CCDC18Q5T9S5 1454 aa6.39□□□□□ -1.39
GABRA1-220ENST00000638159 ZNF784Q8NCA9 323 aaPredicted RBP6.39□□□□□ -1.39
GABRA1-220ENST00000638159 BLMP54132 1417 aaPredicted RBP6.39□□□□□ -1.39
GABRA1-220ENST00000638159 ABCA8O94911 1581 aa6.39□□□□□ -1.39
GABRA1-220ENST00000638159 MIA2Q96PC5 1412 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 SAMD9Q5K651 1589 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 STK26Q9P289 416 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 CFAP74Q9C0B2 1584 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 A2ML1A8K2U0 1454 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 PLA2R1Q13018 1463 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 TRIM37O94972 964 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 PPP4R3CPQ6ZMV5 832 aa6.38□□□□□ -1.39
GABRA1-220ENST00000638159 ZBTB7AO95365 584 aa6.37□□□□□ -1.39
GABRA1-220ENST00000638159 SYTL4Q96C24 671 aaPredicted RBP6.37□□□□□ -1.39
GABRA1-220ENST00000638159 MAP3K1Q13233 1512 aa6.37□□□□□ -1.39
GABRA1-220ENST00000638159 ATP10BO94823 1461 aa6.37□□□□□ -1.39
GABRA1-220ENST00000638159 TCOF1Q13428 1488 aaKnown RBP6.37□□□□□ -1.39
GABRA1-220ENST00000638159 FOXO3O43524 673 aa6.37□□□□□ -1.39
GABRA1-220ENST00000638159 CHIC2Q9UKJ5 165 aa6.37□□□□□ -1.39
GABRA1-220ENST00000638159 XPCQ01831 940 aaPredicted RBP6.36□□□□□ -1.39
GABRA1-220ENST00000638159 KIF13AQ9H1H9 1805 aa6.36□□□□□ -1.39
GABRA1-220ENST00000638159 CCDC85CA6NKD9 419 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms