RNA–Protein interactions for RNA: ENST00000637788.1

ARID1A-217, Transcript of AT-rich interaction domain 1A, human

Gene ARID1A, Length 3,046 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-217	ENST00000637788	PODXL2	Q9NZ53	605 aa		13.8	□□□□□ -0.2
ARID1A-217	ENST00000637788	RNF123	Q5XPI4	1314 aa		13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	POLR1A	O95602	1720 aa	Predicted RBP	13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	C9orf84	Q5VXU9	1444 aa		13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	SENP3-EIF4A1	A0A087X0R7	540 aa		13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	ATP10B	O94823	1461 aa		13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	DHX29	Q7Z478	1369 aa	Known RBP	13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	BCORL1	Q5H9F3	1711 aa		13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	KDM2A	Q9Y2K7	1162 aa		13.79	□□□□□ -0.2
ARID1A-217	ENST00000637788	TSPY4	P0CV99	314 aa		13.78	□□□□□ -0.2
ARID1A-217	ENST00000637788	TSPY10	P0CW01	314 aa		13.78	□□□□□ -0.2
ARID1A-217	ENST00000637788	CDC42BPA	Q5VT25	1732 aa		13.78	□□□□□ -0.2
ARID1A-217	ENST00000637788	DAXX	Q9UER7	740 aa	Predicted RBP	13.77	□□□□□ -0.2
ARID1A-217	ENST00000637788	ABCC10	Q5T3U5	1492 aa		13.77	□□□□□ -0.21
ARID1A-217	ENST00000637788	VSIG10	Q8N0Z9	540 aa		13.77	□□□□□ -0.21
ARID1A-217	ENST00000637788	CARD11	Q9BXL7	1154 aa		13.77	□□□□□ -0.21
ARID1A-217	ENST00000637788	SMG6	Q86US8	1419 aa	Known RBP	13.76	□□□□□ -0.21
ARID1A-217	ENST00000637788	ABCA8	O94911	1581 aa		13.76	□□□□□ -0.21
ARID1A-217	ENST00000637788	FRAT1	Q92837	279 aa	Predicted RBP	13.75	□□□□□ -0.21
ARID1A-217	ENST00000637788	KDM5C	P41229	1560 aa		13.75	□□□□□ -0.21
ARID1A-217	ENST00000637788	KIF15	Q9NS87	1388 aa		13.75	□□□□□ -0.21
ARID1A-217	ENST00000637788	PLEKHG5	O94827	1062 aa		13.74	□□□□□ -0.21
ARID1A-217	ENST00000637788	TCERG1	O14776	1098 aa	Known RBP	13.74	□□□□□ -0.21
ARID1A-217	ENST00000637788	NPM2	Q86SE8	214 aa	Known RBP	13.74	□□□□□ -0.21
ARID1A-217	ENST00000637788	DCAF11	Q8TEB1	546 aa		13.74	□□□□□ -0.21
ARID1A-217	ENST00000637788	SHANK2	Q9UPX8	1470 aa		13.73	□□□□□ -0.21
ARID1A-217	ENST00000637788	ST20-MTHFS	A0A0A6YYL1	179 aa		13.72	□□□□□ -0.21
ARID1A-217	ENST00000637788	RALGAPB	Q86X10	1494 aa		13.72	□□□□□ -0.21
ARID1A-217	ENST00000637788	UHRF1BP1	Q6BDS2	1440 aa		13.72	□□□□□ -0.21
ARID1A-217	ENST00000637788	NFKBIB	Q15653	356 aa		13.72	□□□□□ -0.21
ARID1A-217	ENST00000637788	DDRGK1	Q96HY6	314 aa		13.71	□□□□□ -0.22
ARID1A-217	ENST00000637788	PDE4A	P27815	886 aa		13.7	□□□□□ -0.22
ARID1A-217	ENST00000637788	BACH2	Q9BYV9	841 aa		13.7	□□□□□ -0.22
ARID1A-217	ENST00000637788	MS4A1	P11836	297 aa		13.69	□□□□□ -0.22
ARID1A-217	ENST00000637788	PTPRG	P23470	1445 aa		13.69	□□□□□ -0.22
ARID1A-217	ENST00000637788	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.69	□□□□□ -0.22
ARID1A-217	ENST00000637788	TMC1	Q8TDI8	760 aa		13.69	□□□□□ -0.22
ARID1A-217	ENST00000637788	NUDC	Q9Y266	331 aa		13.68	□□□□□ -0.22
ARID1A-217	ENST00000637788	ARHGEF12	Q9NZN5	1544 aa		13.68	□□□□□ -0.22
ARID1A-217	ENST00000637788	KDM5D	Q9BY66	1539 aa		13.67	□□□□□ -0.22
ARID1A-217	ENST00000637788	RRP9	O43818	475 aa	Known RBP	13.67	□□□□□ -0.22
ARID1A-217	ENST00000637788	PNISR	Q8TF01	805 aa	Known RBP	13.67	□□□□□ -0.22
ARID1A-217	ENST00000637788	ROCK2	O75116	1388 aa	Known RBP	13.67	□□□□□ -0.22
ARID1A-217	ENST00000637788	RGL3	Q3MIN7	710 aa		13.66	□□□□□ -0.22
ARID1A-217	ENST00000637788	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
ARID1A-217	ENST00000637788	CCDC141	Q6ZP82	1450 aa		13.66	□□□□□ -0.22
ARID1A-217	ENST00000637788	SAMD9L	Q8IVG5	1584 aa		13.66	□□□□□ -0.22
ARID1A-217	ENST00000637788	ARHGEF5	Q12774	1597 aa		13.64	□□□□□ -0.23
ARID1A-217	ENST00000637788	FAM135A	Q9P2D6	1515 aa		13.64	□□□□□ -0.23
ARID1A-217	ENST00000637788	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.63	□□□□□ -0.23
ARID1A-217	ENST00000637788	CDC42BPB	Q9Y5S2	1711 aa		13.63	□□□□□ -0.23
ARID1A-217	ENST00000637788	NBPF1	Q3BBV0	1214 aa		13.62	□□□□□ -0.23
ARID1A-217	ENST00000637788	CCDC144A	A2RUR9	1427 aa		13.62	□□□□□ -0.23
ARID1A-217	ENST00000637788	SYCP2	Q9BX26	1530 aa		13.62	□□□□□ -0.23
ARID1A-217	ENST00000637788	PREX2	Q70Z35	1606 aa		13.61	□□□□□ -0.23
ARID1A-217	ENST00000637788	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-217	ENST00000637788	ARHGAP5	Q13017	1502 aa		13.6	□□□□□ -0.23
ARID1A-217	ENST00000637788	RSPH4A	Q5TD94	716 aa		13.59	□□□□□ -0.23
ARID1A-217	ENST00000637788	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.59	□□□□□ -0.23
ARID1A-217	ENST00000637788	PRAG1	Q86YV5	1406 aa		13.59	□□□□□ -0.23
ARID1A-217	ENST00000637788	CHD1	O14646	1710 aa		13.59	□□□□□ -0.23
ARID1A-217	ENST00000637788	RALBP1	Q15311	655 aa		13.58	□□□□□ -0.23
ARID1A-217	ENST00000637788	TTC37	Q6PGP7	1564 aa		13.58	□□□□□ -0.23
ARID1A-217	ENST00000637788	PLA2R1	Q13018	1463 aa		13.58	□□□□□ -0.24
ARID1A-217	ENST00000637788	BRD4	O60885	1362 aa	Predicted RBP	13.57	□□□□□ -0.24
ARID1A-217	ENST00000637788	LRPPRC	P42704	1394 aa	Known RBP	13.57	□□□□□ -0.24
ARID1A-217	ENST00000637788	HSP90AA1	P07900	732 aa	Known RBP	13.57	□□□□□ -0.24
ARID1A-217	ENST00000637788	PLEKHH2	Q8IVE3	1493 aa		13.56	□□□□□ -0.24
ARID1A-217	ENST00000637788	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ARID1A-217	ENST00000637788	A2M	P01023	1474 aa		13.55	□□□□□ -0.24
ARID1A-217	ENST00000637788	TRPM1	Q7Z4N2	1603 aa		13.55	□□□□□ -0.24
ARID1A-217	ENST00000637788		E9PCH4	1651 aa		13.55	□□□□□ -0.24
ARID1A-217	ENST00000637788	KTN1	Q86UP2	1357 aa	Known RBP	13.54	□□□□□ -0.24
ARID1A-217	ENST00000637788	CC2D1B	Q5T0F9	858 aa	Known RBP	13.54	□□□□□ -0.24
ARID1A-217	ENST00000637788	NLRP13	Q86W25	1043 aa		13.53	□□□□□ -0.24
ARID1A-217	ENST00000637788	DISP3	Q9P2K9	1392 aa		13.53	□□□□□ -0.24
ARID1A-217	ENST00000637788	ERCC6L2	Q5T890	1561 aa		13.53	□□□□□ -0.24
ARID1A-217	ENST00000637788	PER1	O15534	1290 aa	Predicted RBP	13.53	□□□□□ -0.24
ARID1A-217	ENST00000637788	FRAT2	O75474	233 aa	Predicted RBP	13.52	□□□□□ -0.24
ARID1A-217	ENST00000637788	PARD3	Q8TEW0	1356 aa		13.52	□□□□□ -0.25
ARID1A-217	ENST00000637788	UNC13B	O14795	1591 aa		13.52	□□□□□ -0.25
ARID1A-217	ENST00000637788	TESK2	Q96S53	571 aa		13.52	□□□□□ -0.25
ARID1A-217	ENST00000637788	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.51	□□□□□ -0.25
ARID1A-217	ENST00000637788	GPRASP1	Q5JY77	1395 aa		13.51	□□□□□ -0.25
ARID1A-217	ENST00000637788	PNN	Q9H307	717 aa	Known RBP	13.5	□□□□□ -0.25
ARID1A-217	ENST00000637788	MAST1	Q9Y2H9	1570 aa		13.5	□□□□□ -0.25
ARID1A-217	ENST00000637788	L1TD1	Q5T7N2	865 aa	Known RBP	13.5	□□□□□ -0.25
ARID1A-217	ENST00000637788	CLCN1	P35523	988 aa		13.5	□□□□□ -0.25
ARID1A-217	ENST00000637788	RRP1	P56182	461 aa	Known RBP	13.5	□□□□□ -0.25
ARID1A-217	ENST00000637788	PANK3	Q9H999	370 aa		13.5	□□□□□ -0.25
ARID1A-217	ENST00000637788	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.49	□□□□□ -0.25
ARID1A-217	ENST00000637788	EXOC6	Q8TAG9	804 aa		13.49	□□□□□ -0.25
ARID1A-217	ENST00000637788	ABCC2	Q92887	1545 aa		13.48	□□□□□ -0.25
ARID1A-217	ENST00000637788	MYO5C	Q9NQX4	1742 aa		13.48	□□□□□ -0.25
ARID1A-217	ENST00000637788	IQGAP3	Q86VI3	1631 aa		13.48	□□□□□ -0.25
ARID1A-217	ENST00000637788	CDCA7L	Q96GN5	454 aa		13.48	□□□□□ -0.25
ARID1A-217	ENST00000637788	RCAN3	Q9UKA8	241 aa		13.48	□□□□□ -0.25
ARID1A-217	ENST00000637788	ERBIN	Q96RT1	1412 aa		13.47	□□□□□ -0.25
ARID1A-217	ENST00000637788	PLXNC1	O60486	1568 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 89 ms