RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-248ENST00000637774 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
CACNA1A-248ENST00000637774 ASXL2Q76L83 1435 aa13.2□□□□□ -0.3
CACNA1A-248ENST00000637774 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
CACNA1A-248ENST00000637774 MLECQ14165 292 aa13.19□□□□□ -0.3
CACNA1A-248ENST00000637774 FANCAO15360 1455 aa13.18□□□□□ -0.3
CACNA1A-248ENST00000637774 TEX14Q8IWB6 1497 aa13.18□□□□□ -0.3
CACNA1A-248ENST00000637774 WASHC2CQ9Y4E1 1318 aa13.17□□□□□ -0.3
CACNA1A-248ENST00000637774 ARHGEF12Q9NZN5 1544 aa13.17□□□□□ -0.3
CACNA1A-248ENST00000637774 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
CACNA1A-248ENST00000637774 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
CACNA1A-248ENST00000637774 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
CACNA1A-248ENST00000637774 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
CACNA1A-248ENST00000637774 ADCY10Q96PN6 1610 aa13.16□□□□□ -0.3
CACNA1A-248ENST00000637774 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
CACNA1A-248ENST00000637774 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
CACNA1A-248ENST00000637774 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
CACNA1A-248ENST00000637774 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
CACNA1A-248ENST00000637774 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
CACNA1A-248ENST00000637774 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-248ENST00000637774 TMF1P82094 1093 aa13.13□□□□□ -0.31
CACNA1A-248ENST00000637774 CDC42BPBQ9Y5S2 1711 aa13.12□□□□□ -0.31
CACNA1A-248ENST00000637774 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
CACNA1A-248ENST00000637774 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-248ENST00000637774 SAFB2Q14151 953 aaKnown RBP eCLIP13.12□□□□□ -0.31
CACNA1A-248ENST00000637774 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
CACNA1A-248ENST00000637774 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
CACNA1A-248ENST00000637774 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
CACNA1A-248ENST00000637774 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
CACNA1A-248ENST00000637774 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
CACNA1A-248ENST00000637774 PANK3Q9H999 370 aa13.1□□□□□ -0.31
CACNA1A-248ENST00000637774 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
CACNA1A-248ENST00000637774 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
CACNA1A-248ENST00000637774 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.32
CACNA1A-248ENST00000637774 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
CACNA1A-248ENST00000637774 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
CACNA1A-248ENST00000637774 ESF1Q9H501 851 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-248ENST00000637774 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
CACNA1A-248ENST00000637774 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
CACNA1A-248ENST00000637774 STK26Q9P289 416 aa13.06□□□□□ -0.32
CACNA1A-248ENST00000637774 TNNT2P45379 298 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-248ENST00000637774 ARID4BQ4LE39 1312 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-248ENST00000637774 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
CACNA1A-248ENST00000637774 DHX29Q7Z478 1369 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-248ENST00000637774 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
CACNA1A-248ENST00000637774 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
CACNA1A-248ENST00000637774 ERBINQ96RT1 1412 aa13.04□□□□□ -0.32
CACNA1A-248ENST00000637774 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
CACNA1A-248ENST00000637774 PRAG1Q86YV5 1406 aa13.02□□□□□ -0.33
CACNA1A-248ENST00000637774 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-248ENST00000637774 ABCC1P33527 1531 aa13.01□□□□□ -0.33
CACNA1A-248ENST00000637774 A2MP01023 1474 aa13.01□□□□□ -0.33
CACNA1A-248ENST00000637774 RALGAPBQ86X10 1494 aa13□□□□□ -0.33
CACNA1A-248ENST00000637774 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
CACNA1A-248ENST00000637774 RALBP1Q15311 655 aa12.99□□□□□ -0.33
CACNA1A-248ENST00000637774 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
CACNA1A-248ENST00000637774 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-248ENST00000637774 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
CACNA1A-248ENST00000637774 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-248ENST00000637774 TESK2Q96S53 571 aa12.98□□□□□ -0.33
CACNA1A-248ENST00000637774 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
CACNA1A-248ENST00000637774 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACNA1A-248ENST00000637774 UHRF1BP1Q6BDS2 1440 aa12.97□□□□□ -0.33
CACNA1A-248ENST00000637774 FBXO31Q5XUX0 539 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-248ENST00000637774 NLRP13Q86W25 1043 aa12.97□□□□□ -0.33
CACNA1A-248ENST00000637774 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.34
CACNA1A-248ENST00000637774 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.34
CACNA1A-248ENST00000637774 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
CACNA1A-248ENST00000637774 PNISRQ8TF01 805 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-248ENST00000637774 IDI1Q13907 227 aa12.94□□□□□ -0.34
CACNA1A-248ENST00000637774 POGKQ9P215 609 aa12.94□□□□□ -0.34
CACNA1A-248ENST00000637774 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
CACNA1A-248ENST00000637774 KDM5DQ9BY66 1539 aa12.94□□□□□ -0.34
CACNA1A-248ENST00000637774 ZFYVE16Q7Z3T8 1539 aa12.93□□□□□ -0.34
CACNA1A-248ENST00000637774 UGGT1Q9NYU2 1555 aa12.93□□□□□ -0.34
CACNA1A-248ENST00000637774 MAST1Q9Y2H9 1570 aa12.92□□□□□ -0.34
CACNA1A-248ENST00000637774 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-248ENST00000637774 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
CACNA1A-248ENST00000637774 ATP10AO60312 1499 aa12.92□□□□□ -0.34
CACNA1A-248ENST00000637774 EIF3AQ14152 1382 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-248ENST00000637774 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-248ENST00000637774 NOS1P29475 1434 aa12.91□□□□□ -0.34
CACNA1A-248ENST00000637774 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
CACNA1A-248ENST00000637774 CENPJQ9HC77 1338 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-248ENST00000637774 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
CACNA1A-248ENST00000637774 BCORL1Q5H9F3 1711 aa12.9□□□□□ -0.34
CACNA1A-248ENST00000637774 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
CACNA1A-248ENST00000637774 KDM5CP41229 1560 aa12.89□□□□□ -0.35
CACNA1A-248ENST00000637774 MINK1Q8N4C8 1332 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-248ENST00000637774 POGZQ7Z3K3 1410 aa12.89□□□□□ -0.35
CACNA1A-248ENST00000637774 PER1O15534 1290 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-248ENST00000637774 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
CACNA1A-248ENST00000637774 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
CACNA1A-248ENST00000637774 CABP2Q9NPB3 220 aa12.88□□□□□ -0.35
CACNA1A-248ENST00000637774 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
CACNA1A-248ENST00000637774 MORC1Q86VD1 984 aa12.87□□□□□ -0.35
CACNA1A-248ENST00000637774 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
CACNA1A-248ENST00000637774 ADAMTS8Q9UP79 889 aa12.87□□□□□ -0.35
CACNA1A-248ENST00000637774 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
CACNA1A-248ENST00000637774 UNC13BO14795 1591 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms